KEGG   Aquifex aeolicus: aq_298
Entry
aq_298            CDS       T00013                                 
Symbol
serS
Name
(RefSeq) seryl-tRNA synthetase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
aae  Aquifex aeolicus
Pathway
aae00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:aae00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    aq_298 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:aae01007]
    aq_298 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aae03016]
    aq_298 (serS)
Enzymes [BR:aae01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     aq_298 (serS)
Amino acid related enzymes [BR:aae01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   aq_298 (serS)
Transfer RNA biogenesis [BR:aae03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    aq_298 (serS)
 Prokaryotic type
    aq_298 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N FapA DUF4201 BAR_3 GAS NPV_P10 Fmp27_WPPW Fzo_mitofusin TMPIT APG6_N HAUS-augmin3 ERM_helical CM_2 EzrA ATG16 V_ATPase_I EAD9 FlxA TPR_MLP1_2 FBF1 DUF3450 FemAB DUF1192 PCRF DUF1664 CCDC93_CC DUF4515 AAA_13 BAR_4 Troponin BLOC1_2 TMF_TATA_bd Phage_GP20
Other DBs
NCBI-GeneID: 1192881
NCBI-ProteinID: NP_213207
UniProt: O66647
Structure
Position
complement(193284..194561)
AA seq 425 aa
MIDINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSKEI
GKLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGEDEK
DNVEVRRWGEPRKFDFEPKPHWEIGERLGILDFKRGAKLSGSRFTVIAGWGARLERALIN
FMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCERDNLYLIPTAEVPLTNLY
REEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDELE
KLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCEDFQ
ARRMNTRFKDSKTGKNRFVHTLNGSGLAVGRTLAAILENYQQEDGSVVVPEVLRDYVGTD
VIRPE
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgatagatataaacctcattagggaaaaacccgattacgtgaaggaaagactcgcaacg
agggataaagaactcgtttccttagttgacaaagttcttgaacttgacaaaaggagaagg
gaaataataaaaagacttgaagccttaaggagtgagaggaataaactgagcaaggaaata
ggaaaactaaagagggaaggcaaggacaccacggaaatacaaaacagagtaaaggaattg
aaagaggaaatagacagacttgaggaagagttaaggaaagtggaagaggagttaaagaac
acgctcctctggatacctaacctcccccacccgagtgttccagtgggagaggacgaaaag
gacaacgtggaagtaaggagatggggagagccgaggaagtttgattttgaaccaaaacct
cactgggaaataggggaaagattgggaattctcgacttcaagaggggtgcaaagctctct
ggaagcaggtttaccgtaatagccggctggggtgcgagattagaaagggcgcttataaac
tttatgctggacctccacaccaaaaagggctacaaggaaatatgtcctccccatttggta
aagccggaaatcttaataggaactggacagctaccgaagtttgaagaggacctctacaag
tgtgaaagggataacctctacctgatacccaccgcggaagttcccctgacaaacctctac
agagaagagatactcaaggaagagaaccttcccatatatctcactgcgtacacgccctgt
tacagaagggaagcgggagcatacggaaaagacataagggggataataagacagcaccag
tttgacaaagtagaacttgtgaagatagtccacccggacacttcttacgatgagcttgag
aaacttgtaaaagacgctgaagaagttctccagcttctcggacttccatacagggtggtg
gaactctgcacgggtgacctcggtttttccgccgcaaagacctacgacatagaagtgtgg
tttccctctcaaaacaagtacagggaaatctcctcctgctccaactgcgaggactttcaa
gcgaggaggatgaacacgcgctttaaggactcaaaaactggtaaaaataggttcgtacac
actctgaacggctccggacttgcggtgggaaggactctggcggctatattggaaaactac
caacaggaagacggtagcgtagtagttccggaagttctcagagattacgtgggaacggac
gtgattagacccgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (77)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (34)   
   Pfam (34)   
All databases (131)   

Download RDF
DBGET integrated database retrieval system