KEGG   Arabidopsis thaliana (thale cress): AT1G78720
Entry
AT1G78720         CDS       T00041                                 
Name
(RefSeq) SecY protein transport family protein
  KO
K10956  protein transport protein SEC61 subunit alpha
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03060  Protein export
ath04141  Protein processing in endoplasmic reticulum
ath04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AT1G78720
   04141 Protein processing in endoplasmic reticulum
    AT1G78720
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    AT1G78720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G78720
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ath02044]
    AT1G78720
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   SEC61 complex
    AT1G78720
Secretion system [BR:ath02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   AT1G78720
SSDB
Motif
Pfam: SecY Plug_translocon
Other DBs
NCBI-GeneID: 844208
NCBI-ProteinID: NP_001319405
TAIR: AT1G78720
UniProt: Q9ZV90 A0A654EQ54
Position
1:29605457..29607678
AA seq 475 aa
MVGGFRVIHLVRPFLAFLPEVQSPERKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASSRGTVMELGITPIVTSGMVMQLLAGSKIIEIDNNVREDRALLNGAQK
LLGILIAVGQAVAYVLSGMYGSVGELGVGNAILIIVQLCFAAIIVLCLDELLQKGYGLGS
GISLFIATNICESIIWKAFSPTTINSGRGAQFEGAVIALFHLLITRTDKVRALREAFFRQ
NLPNVTNLHATVLIFLIVIYFQGFRVVLPVRSKNARGQRGSYPIKLFYTSNMPIILQSAL
VSNIYFISQILYRKFGGNFLVNLIGTWKESEYSGQSIPVGGIAYYITAPSSLAEMATHPF
HALFYLVFMLAACALFSKTWIEVSGSSAKDVARQLREQQMVMPGHRDSNLQKELNRYIPT
AAAFGGLCIGALTVLADLMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGL
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggtaggagggtttagagtgattcatcttgtgagaccgttccttgcattcttaccagaa
gtccaatctccagaaaggaagattccgtttagagagaaagtcatatacactgtgatctct
ctcttcatcttcttggtttgtagtcaattgccactttatggaatccattccactacaggc
gcggatccattctattggatgcgcgtcattcttgcttcaagccgaggtactgttatggag
cttggtattacaccaatcgtcacctccggaatggttatgcagcttcttgctggttccaag
atcattgaaatcgataacaatgtccgtgaagaccgtgcactcttgaatggtgcacagaag
ctgttgggaatcctcatcgcggttggccaagcagttgcatatgttctctctgggatgtat
ggtagtgttggggaactaggagttggtaatgctattcttatcatagttcagctctgtttt
gctgccattatcgttctttgtttagatgagcttcttcagaaaggttatggcctcggttct
ggtatttcccttttcattgctactaatatctgtgaaagcattatatggaaagcattcagt
cctacaaccatcaacagtgggcgtggagctcaatttgaaggagctgttattgctcttttc
caccttctcattactcgaacggataaagtccgcgcacttcgtgaagcgtttttcaggcag
aaccttcccaatgtgacgaatctgcatgccacagtcttgatctttctgatagtgatttac
tttcaaggctttcgggtagttttaccagtgagatcaaagaatgctcgtggacaacgaggc
tcttatcctatcaaattgttctacacctccaacatgcctatcatcttgcagtcagctctt
gtttccaatatctacttcatctctcagatattatacagaaagtttggtgggaactttttg
gtgaacttaatcggtacgtggaaggagtcagaatacagcgggcaatctatccccgttggt
ggtattgcgtactacataaccgctccgtcaagcttagctgagatggcaactcatcctttt
cacgctctgttctatcttgtgttcatgttagccgcgtgtgcgttgttctctaaaacctgg
attgaagtctccggttcatcagccaaagatgtcgccagacaactaagagaacagcaaatg
gtaatgcctggtcaccgagactcaaaccttcaaaaggaactgaaccgatacattcccacg
gctgcagcttttggtggtctgtgtatcggtgcactcactgtcttggctgatttaatggga
gctattgggtcaggcactggaatccttcttgcggttacaatcatatatcagtatttcgaa
accttcgaaaaagaaaaagcaagcgagctaggtttcttcggtttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (43)   

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