KEGG   Arabidopsis thaliana (thale cress): AT2G18710
Entry
AT2G18710         CDS       T00041                                 
Symbol
SCY1
Name
(RefSeq) SECY homolog 1
  KO
K10956  protein transport protein SEC61 subunit alpha
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03060  Protein export
ath04141  Protein processing in endoplasmic reticulum
ath04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AT2G18710 (SCY1)
   04141 Protein processing in endoplasmic reticulum
    AT2G18710 (SCY1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    AT2G18710 (SCY1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT2G18710 (SCY1)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ath02044]
    AT2G18710 (SCY1)
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   SEC61 complex
    AT2G18710 (SCY1)
Secretion system [BR:ath02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   AT2G18710 (SCY1)
SSDB
Motif
Pfam: SecY TssN
Other DBs
NCBI-GeneID: 816386
NCBI-ProteinID: NP_179461
TAIR: AT2G18710
UniProt: Q38885 A0A178VZD7
Position
2:complement(8112084..8114485)
AA seq 551 aa
MITVSEVSSYSSSSSNFASLSRLNHKSSSRLRSSSLYKGSFFSVSTKTRRNTCKAKSWNL
GLVINSRSSEASVFDPLGINPDETSGLSSIWESFVSLLSPSFESSSGNRRDKPSSGRGVA
AAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSILST
LDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRY
ASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTS
LLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGIVYVQEAERKIPLNYA
SRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNVAFALTPG
GSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTVLGRI
SVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKN
IEFYELDKYDP
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgataacggtaagcgaagtttcctcttactcttcttcttcttcaaacttcgcgtctctg
tctcgtctcaatcacaaatcatcttcgagattgcgaagctcttctctttacaaaggaagc
ttcttctctgtttcgacaaagaccaggaggaacacttgtaaagccaaatcatggaatctc
ggtcttgttatcaactctagaagctctgaggcttcggtttttgatccgttggggatcaat
ccagatgaaacttctggtttaagtagcatttgggaaagctttgtgagtcttttgtcacca
tcatttgaaagctcttccggtaacaggcgagataagccgtcttctggtagaggcgtggca
gctgctattgaggacagttccattgattttggagatttcttcaaagggccattgccaggg
aagtttctgaagcttcttgggtttttagctctctctcggcttggaatttacataccactc
ggcggggttaatcgagaagcttttgttggaaatttggatcagaatagcattttgagcact
ttggatacattttctggtggaggcataggtagacttggtatatgttctctcgggattgtt
cctttcatcaacgctcagattgtgtttcagcttcttgctcaagtctatccaaagttgcaa
gatcttcagaaaaaagaaggtgaagctggtagaaaaaagattcttcagtatactagatat
gcttcagttggttttgcgatagtacaagcaatcggacaagtgttttaccttcgtccttac
gttaatgacttcagcacggaatgggttgtttcttctgttacgttgttaacgcttggttct
gttctcactacatatattggagagagaatctctgatctgaaacttggaaatggcacttcc
ctattgattttcacaagtatcatctcttacttgcctgcatcattcggtagaacaacagca
gaggccttacaggaaggaaactatactggtcttggaaccatcgttgtttcatttctcctc
ttggtactcgggatagtatatgttcaggaagcagagaggaaaattccgctcaattatgcc
tcgcgatacaccagcaaagctggtgggcttcagaaatctgcttatcttccattcaaggtc
aatagtgcgggagtaatgcctatcatattctccacatcatctcttgctcttcctgctact
ttagcacgatttaccggcatatctgctttgaagaatgttgcttttgctttaacccctgga
ggttctttctatcttccaaccaatatacttctcatagctttcttcaactactactacact
ttcttgcaacttgacccggacgacgtgagtgaacaattaaaacgccaaggtgcatcaatc
cctctagtccgacctggtaaaagcactgctctcttcatcaaaaccgtccttggccggata
tcggttcttggttctgcatttctggctgttctagctgctggtcctgctgtagtcgaacag
atcactcacttgacagcattcagaggatttgcaggcacttctgttctgatccttgtcggg
tgtgcgacagatactgcaagaaaggttcaagcagagataatctcgcaaaagtacaagaac
attgagttttacgagcttgacaagtatgatccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (3)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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