KEGG   Arabidopsis thaliana (thale cress): AT1G01350
Entry
AT1G01350         CDS       T00041                                 
Name
(RefSeq) Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
  KO
K13127  RING finger protein 113A
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT1G01350
Spliceosome [BR:ath03041]
 Complex C
  Other components
   Complex C specific factors
    AT1G01350
SSDB
Motif
Pfam: zf-CCCH zf-C3HC4_3 zf_CCCH_4 zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-CCCH_4 zf-CCCH_2 zf-RING_10 SidM_Rab1-act zf-C3HC4_4
Other DBs
NCBI-GeneID: 838964
NCBI-ProteinID: NP_171642
TAIR: AT1G01350
UniProt: Q8GX84 C0SUR6
Position
1:136090..138162
AA seq 343 aa
MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES
SILQNLKKVAKPDSKLYFSSGPSKSSTTTSGAPERSVFHYDSSKEIQVQNDSGATATLET
ETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKA
GGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEW
EEAEKVRKRNKAMGVEDEDDEADKDSDEDENALPFACFICREPFVDPVVTKCKHYFCEHC
ALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERSKAEQGL
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgtcagattctggtgagcctaaaccttctcagcaagaagaacctctacctcaacctgct
gcccaagaaactcagtctcaacaagtttgcactttcttcaagaagccaacgaaaagtaaa
aacataagaaaaagaaccattgacgctgatgaagaagacggagattcgaaaagcgaaagc
tctattctacaaaatctaaagaaagttgcaaaacccgatagcaagttatacttttcttct
ggaccatctaagagttctactacaacgagtggagctcctgagaggtccgtctttcactac
gattcatccaaggaaatccaggttcagaacgacagtggagcaacagcaacccttgaaact
gagaccgacttcaatcaagacgcacgagctatccgtgagagagttcttaaaaaagcagac
gaagcattgaaagggaataagaaaaaggcttctgatgagaagctgtacaaaggaattcat
ggatatacagatcacaaagctgggtttagaagagaacaaacaatctcgagcgagaaagct
ggaggctcacacgggccattaagagcttctgctcacataagagtgtcggctagattcgat
taccagccagacatttgcaaggattacaaagaaaccggatactgtggatatggagattcg
tgtaagttcttgcatgaccgtggggattacaaaccaggatggcagatagagaaagagtgg
gaagaagcagagaaagttaggaagagaaataaagctatgggagttgaggatgaagatgat
gaggctgacaaggatagcgacgaagacgaaaatgcattgccctttgcttgcttcatttgc
agggagccttttgttgatccagttgtcaccaaatgcaagcattacttctgtgagcattgt
gctttaaagcatcacacgaagaacaagaagtgctttgtgtgtaaccaaccaacaatgggg
attttcaatgcagcacatgagatcaagaagagaatggctgaagaacggagtaaagctgaa
caaggattgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (52)   

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