KEGG   Arabidopsis thaliana (thale cress): AT1G08540
Entry
AT1G08540         CDS       T00041                                 
Symbol
SIG2
Name
(RefSeq) RNApolymerase sigma subunit 2
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 GerE HTH_3 TMEM215
Other DBs
NCBI-GeneID: 837376
NCBI-ProteinID: NP_172330
TAIR: AT1G08540
UniProt: O22056
Position
1:2703295..2706860
AA seq 572 aa
MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPALLTSMLDVAKLRL
PSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALARA
AVKVAKDATLFKNSNNTNLLTSSTADKRSKWDQFTEKERAGILGHLAVSDNGIVSDKITA
SASNKESIGDLESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPSVKT
GSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTE
RSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQD
LVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRV
KEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVI
ADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVS
RERVRQIESSAFRKLKNKKRNNHLQQYLVAQS
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgtcttcttgtcttcttcctcagttcaagtgcccacctgattctttctctattcacttc
cgaacctctttctgtgcccctaaacacaacaagggttcagtcttcttccaaccgcaatgt
gcagtatccacttcaccggcgttattaacttctatgcttgatgtcgcaaagcttagacta
ccctctttcgatactgattcggattcccttatatcagacaggcagtggacttatacaagg
cccgatggtccttccactgaggcgaagtatttagaagctttagcctctgagacacttctc
acaagcgatgaagcagtagttgtagcagcagcagctgaagcagtcgcccttgcaagagct
gctgtcaaagttgccaaagatgcaacattatttaagaacagtaacaacacgaacctatta
acttcgtcaacggccgacaaacgctccaagtgggaccagtttactgagaaggaacgtgct
ggcatattggggcatctagcggtttcggacaatggaattgtgagtgataaaatcactgca
tctgcctctaacaaagagtctattggtgatttagaatcagaaaaacaagaagaagttgag
cttctggaggagcaaccttcagtgagtttagctgtgagatctacacgtcaaactgaaagg
aaagctcggagggcaaaagggttagagaaaactgcatcaggtattccgtctgtgaagact
ggttcgagccctaaaaagaaacgtcttgttgcgcaggaagttgatcataatgatcctttg
cgttatctaagaatgacaacaagcagttccaagcttctcactgtcagagaagaacatgag
ctgtcggcaggaatacaggaccttctgaagttagaaagacttcaaacagagcttacagag
cgtagtggacgtcagccaacctttgcgcagtgggcttctgctgctggagtcgatcagaaa
tcattaaggcaacgtatacatcatggcacactatgcaaagacaaaatgatcaaaagcaac
attcgactcgttatttcgattgcaaagaattatcaaggagctgggatgaacctccaagat
cttgtccaggaagggtgcagagggcttgtgaggggagcagagaagtttgatgctacaaag
ggttttaaattttcgacttacgcgcattggtggatcaagcaagctgtgcggaagtctctc
tctgatcagtccagaatgataagattgccttttcacatggtggaagcaacatatagggtg
aaagaggcacgaaagcaactgtacagtgaaaccggtaagcacccaaagaacgaagaaatt
gcagaggcaacagggctgtcgatgaagagactcatggcggttctactctctcctaaacct
ccgaggtcgctagaccagaaaatcggaatgaatcaaaacctcaaaccttcggaagtgata
gcagatccagaagcagtaacgtcagaagatatactgataaaggaattcatgaggcaggac
ttggacaaagtgttggactcgttgggtacaagggagaaacaagtgatacgttggagattt
gggatggaggatgggagaatgaagacgttgcaagagataggagagatgatgggagtgagc
agggagagagtaagacagatagagtcatctgcattcaggaaactaaagaacaagaagaga
aacaaccatttgcagcaatacttggttgcacaatcataa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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