KEGG   Arabidopsis thaliana (thale cress): AT1G09060
Entry
AT1G09060         CDS       T00041                                 
Name
(RefSeq) JmjC domain protein JMJ24
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G09060
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     AT1G09060
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    AT1G09060
SSDB
Motif
Pfam: WRC zf-4CXXC_R1 JmjC
Other DBs
NCBI-GeneID: 837427
NCBI-ProteinID: NP_001318961
TAIR: AT1G09060
UniProt: F4HZD1
Position
1:complement(2921064..2925826)
AA seq 944 aa
MQVNFDETCDSVIRMNANEQTRSANGIGNGNGESIPGIPDDLRCKRSDGKQWRCTAMSMA
DKTVCEKHYIQAKKRAANSAFRANQKKAKRRSSLGETDTYSEGKMDDFELPVTSIDHYNN
GLASASKSNGRLEKRHNKSLMRYSPETPMMRSFSPRVAVDLNDDLGRDVVMFEEGYRSYR
TPPSVAVMDPTRNRSHQSTSPMEYSAASTDVSAESLGEICHQCQRKDRERIISCLKCNQR
AFCHNCLSARYSEISLEEVEKVCPACRGLCDCKSCLRSDNTIKVRIREIPVLDKLQYLYR
LLSAVLPVIKQIHLEQCMEVELEKRLREVEIDLVRARLKADEQMCCNVCRIPVVDYYRHC
PNCSYDLCLRCCQDLREESSVTISGTNQNVQDRKGAPKLKLNFSYKFPEWEANGDGSIPC
PPKEYGGCGSHSLNLARIFKMNWVAKLVKNAEEIVSGCKLSDLLNPDMCDSRFCKFAERE
ESGDNYVYSPSLETIKTDGVAKFEQQWAEGRLVTVKMVLDDSSCSRWDPETIWRDIDELS
DEKLREHDPFLKAINCLDGLEVDVRLGEFTRAYKDGKNQETGLPLLWKLKDWPSPSASEE
FIFYQRPEFIRSFPFLEYIHPRLGLLNVAAKLPHYSLQNDSGPKIYVSCGTYQEISAGDS
LTGIHYNMRDMVYLLVHTSEETTFERVRKTKPVPEEPDQKMSENESLLSPEQKLRDGELH
DLSLGEASMEKNEPELALTVNPENLTENGDNMESSCTSSCAGGAQWDVFRRQDVPKLSGY
LQRTFQKPDNIQTDFVSRPLYEGLFLNEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCP
FQITNLQSNIQVALDFLCPESVGESARLAEEIRCLPNDHEAKLQILEIGKISLYAASSAI
KEVQKLVLDPKFGAELGFEDSNLTKAVSHNLDEATKRPQQNSCT
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgcaggtcaattttgatgaaacttgtgattcagtgattagaatgaatgctaatgagcaa
actcgatccgccaatggcattggcaatggcaatggtgagtctattcccgggattccagat
gacttacggtgcaagagatcggatggtaaacagtggagatgcactgcaatgtccatggct
gataagactgtttgtgagaagcactacatccaagcaaagaagcgggcggctaattctgct
ttcagggcgaaccagaagaaagcgaaaaggcgatcatcgttaggcgaaacagatacgtat
tcggaagggaagatggatgatttcgagttaccagtcaccagcattgaccactataataac
ggtcttgcctctgcttccaagagtaatggtagactagagaagagacataataaaagcctg
atgcggtactcgcccgagacaccgatgatgaggagtttctctccacgtgttgcagtggat
ttgaatgatgacttgggtagagatgttgtaatgtttgaagagggctacagatcttatagg
acaccaccatctgttgctgttatggatccgacacgaaacagatcacaccaaagcaccagt
cctatggaatactcagcagcaagcacagatgtgtctgcagagtctttgggggaaatctgc
catcaatgccagagaaaagatagagagagaatcatttcttgcctcaaatgcaatcaaaga
gccttctgccacaattgtctatcggcaaggtactcggagatatcacttgaagaagtcgag
aaagtttgccctgcatgtcgtggcttgtgtgattgcaaatcttgcctgcgttcagataat
acaataaaggttcggatccgggaaatacccgttttggacaagttgcagtatctttatcgt
ctattatcagctgtcctaccagtcataaagcagatccatcttgaacaatgtatggaagtt
gaactagagaagaggcttcgtgaagttgagattgatcttgtcagggcaagattgaaagca
gatgagcagatgtgctgcaacgtgtgtcggataccagttgttgactactaccgtcactgt
ccgaactgctcatatgacctttgcctgagatgctgtcaagatctacgggaagagtcttca
gtgacgattagtgggactaaccaaaacgtacaagatagaaaaggagctcccaaactaaaa
ctaaacttttcatacaagtttcctgagtgggaagccaacggtgatgggagcatcccttgc
cctcctaaggagtatggaggctgcggttcacattctttgaatcttgcccgcattttcaag
atgaattgggttgcaaagcttgtgaaaaatgctgaggagattgttagtggctgcaaatta
tctgatcttctgaaccctgatatgtgtgattcaagattctgcaaatttgctgagagagaa
gagagcggtgacaactacgtgtacagcccgtcgcttgaaacgattaaaactgatggagta
gctaagtttgagcaacaatgggcagagggtcggcttgttactgtgaaaatggtacttgat
gactcatcttgctctagatgggatcctgagactatttggagggatatagacgagctttcg
gacgagaaactgagagaacatgatccattcttgaaggccattaattgcttggatggttta
gaggttgatgtaagacttggggagtttacaagagcatataaagatggaaagaaccaagag
acaggtcttccgctattgtggaagttaaaggactggccgagcccaagtgcttccgaggag
ttcattttctaccaaagacctgagtttatcagaagttttccgtttctcgagtacattcat
ccccggttaggccttctgaatgttgcagccaagttacctcattactcgctccaaaacgat
tcaggtccaaagatttatgtgtcttgtgggacgtaccaagaaatcagtgctggcgattca
ttgactggtattcactacaacatgcgtgacatggtatacctattggtgcacacgtctgaa
gaaacaacattcgaaagggtgagaaaaacaaaacctgttccagaggaacctgaccagaag
atgagcgaaaatgagtcacttcttagccctgagcagaaattaagggacggagagttacat
gatctatcacttggtgaagccagtatggagaagaatgaacctgagttggcgttgactgtg
aatccagagaacttaacggaaaacggtgacaacatggaatcttcttgcacatcttcatgt
gcaggaggagcccagtgggatgtctttcgacgccaagacgtcccaaagttgtccgggtat
ttgcagagaacattccagaagcctgataatatccagactgattttgtgtcacgcccgttg
tatgaaggattgttcttaaatgaacaccacaagagacaactaagagacgagtttggagtt
gagccatggacatttgagcaacatcgtggtgaggctatcttcattccggctggatgtccg
ttccaaatcactaatcttcagtcgaatattcaggtggcacttgacttcttgtgccctgaa
agcgttggagagtcagcaagactagctgaagaaatccggtgtttaccaaacgaccacgag
gcaaaacttcagattctagagattggaaagatatcattatacgcagctagctcagccatt
aaagaggttcagaaactggtcttggatccaaagtttggagcagagcttggatttgaagac
tctaacttaaccaaagcagtctctcacaacttagacgaggcaaccaagcggccgcagcaa
aacagctgcacttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (5)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (72)   

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