KEGG   Arabidopsis thaliana (thale cress): AT1G18080
Entry
AT1G18080         CDS       T00041                                 
Symbol
ATARCA
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G18080 (ATARCA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT1G18080 (ATARCA)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     AT1G18080 (ATARCA)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT1G18080 (ATARCA)
  Exosomal proteins of colorectal cancer cells
   AT1G18080 (ATARCA)
  Exosomal proteins of bladder cancer cells
   AT1G18080 (ATARCA)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 PROPPIN WD40_like
Other DBs
NCBI-GeneID: 838388
NCBI-ProteinID: NP_173248
TAIR: AT1G18080
UniProt: O24456 A0A178WHX3
Structure
Position
1:6222201..6224242
AA seq 327 aa
MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT
GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI
VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN
LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHA
LCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTS
LNWSADGSTLFSGYTDGVIRVWGIGRY
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcggaaggactcgttttgaagggcaccatgcgtgcacacactgacatggtgacggca
atcgccaccccaatcgataacgcagacatcatcgtctcagcttcccgcgacaaatccatc
attttgtggaaactcaccaaggacgacaaagcctacggtgtagctcagaggcgtctcact
ggtcactctcacttcgttgaggatgttgttctctcctccgatggacaattcgcgctttcc
ggcagctgggacggcgagctccgtctttgggatcttgctgctggtgtctccactcgtaga
ttcgttggacacaccaaggacgtgctctccgtcgccttctcactcgacaaccgtcagatc
gtctctgcatctcgtgaccgtacgatcaagctgtggaacactcttggtgagtgcaagtac
accatttcagaaggtggtgagggacaccgtgattgggttagctgcgtcagattcagccct
aacacgcttcagccgacgattgtatctgcttcgtgggacaagaccgtgaaagtgtggaac
ctttcgaactgcaagctcagatcgactcttgctggtcacaccggttacgtgagcactgtg
gctgtatcacctgatggttctctttgtgcaagtggaggcaaagacggtgttgttttgctg
tgggatttggctgaggggaagaagctttactctcttgaagctaactctgtgatccatgct
ctttgcttcagtcccaacaggtactggctctgtgctgcaactgaacatggtattaagatt
tgggaccttgagagcaagagcattgttgaggatttgaaggttgatctcaaggctgaggct
gaaaaggctgacaacagtggtcctgctgccaccaagaggaaggttatttactgcacaagc
cttaactggagcgctgatggaagcaccctcttcagtggttacaccgatggagtcattaga
gtttggggtattggtcgttactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (49)   

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