KEGG   Arabidopsis thaliana (thale cress): AT1G21700
Entry
AT1G21700         CDS       T00041                                 
Symbol
SWI3C
Name
(RefSeq) SWITCH/sucrose nonfermenting 3C
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AT1G21700 (SWI3C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT1G21700 (SWI3C)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G21700 (SWI3C)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     AT1G21700 (SWI3C)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    AT1G21700 (SWI3C)
   PBAF complex
    AT1G21700 (SWI3C)
   GBAF(ncBAF) complex
    AT1G21700 (SWI3C)
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 SANT_DAMP1_like BSP_II
Other DBs
NCBI-GeneID: 838774
NCBI-ProteinID: NP_173589
TAIR: AT1G21700
UniProt: Q9XI07
Position
1:complement(7620001..7624166)
AA seq 807 aa
MPASEDRRGKWKRKKRGGLSAARKPKQEEEDMEEEDEENNNNNNEEMDDVENADELQQNG
GATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRGQGSL
PALENISFGQLQALSTVPADSLDLERSDGSSSAYVISPPPIMDGEGVVKRFGDLVHVLPM
HSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQG
LVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSI
DSLIKFDKPNCRHKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCSRPLPTVYFQSQ
KKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNE
NWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHKGTDSNGDL
PGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDRMKSEG
MQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFRAGLSAAATKAKLFADH
EEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLSARF
GSPGGISPQTNNLQGMSLSTGGNNINSLMHQQHQQQQASATSQPSIIPGFSNNPQVQAQM
HFMARQQQQQQQQQQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNNQLNNPAAAGAA
SINQPSFSHPMVRSSTGSGSGSGLGLN
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgccagcttctgaagatagaagagggaaatggaaaaggaagaagagaggggggttatcg
gcggcgaggaaaccgaaacaagaggaggaagatatggaggaagaagacgaagagaataac
aacaacaacaacgaagaaatggatgacgttgaaaatgccgatgagcttcagcaaaacggc
ggcgcaactcccgatccgggacttggtattggcgaggtagttgaagattctggttcgcgc
atctctgatttcccggcagtggttaagcgtgttgtgatccggccacacgcgtctgtaatg
gctgttgtggcggctgagagagctggtttgataggggagactagagggcaaggttcactt
ccagctctggagaacatttcgtttgggcaattgcaagcgttatctactgtacctgctgat
tctcttgatcttgagaggagtgatggatcgtcttcggcttatgttatctctccaccacct
attatggatggagaaggagttgttaaacggtttggggatctggttcatgtcttgcctatg
cattcagattggtttgcaccaaacacagtagatcgacttgaaaggcaagtggtgccacag
tttttctctgggaaatcgccaaatcatacacccgaaagttatatggaattcaggaacgcc
attgtttccaaatatgtagagaaccctgaaaagacactgacgatttctgattgccaagga
ttggtagatggtgttgacattgaagattttgcacgagttttccgttttcttgatcactgg
ggaataatcaattactgtgccactgcccagtcacatcctggccctttgagagatgtatcg
gatgtgagggaggacacaaatggcgaggtcaatgtgccgtctgctgctttaacatctatt
gatagtttgatcaaatttgacaagcccaactgtagacacaaggggggtgaagtctattca
tccttgccaagtttggatggtgacagccctgacttggacatcagaattcgtgaacaccta
tgtgatagtcattgcaaccattgttctcgaccgcttccaactgtgtacttccaatcgcaa
aagaagggggatatactcttatgctgtgattgttttcaccatggaagatttgttgttgga
cattcttgtcttgactttgtaagagtggatccaatgaaattttatggcgatcaagatgga
gacaattggactgatcaggaaactctcttgcttcttgaagctgtggaactctacaatgaa
aattgggttcaaattgctgatcatgttggttccaagtcaaaagctcaatgcattcttcat
tttcttcgattacctgtggaggatggtctattagataatgttgaggtttctggtgtaact
aatacggaaaaccctacaaatggatatgaccacaaaggaacagattcaaatggggattta
cctggatattccgagcaaggttctgacactgagatcaagcttccatttgtgaagtctccg
aatccggttatggcattggttgcatttttggcatcagctgttggacctcgagttgctgcg
tcctgtgcccatgaatccctctcggttttatctgaggacgataggatgaaatctgaggga
atgcaagggaaagaagccagcttgcttgatggagaaaatcaacagcaagatggagcacac
aaaacatcaagccaaaacggagcagaagcgcagactccactgccacaggataaggttatg
gcagcatttagagccggtctatcagctgcagcaacaaaagcaaaattgtttgctgatcat
gaggaacgcgaaatccagagactttctgctaatatcgttaatcaccagctgaagaggatg
gagctgaaattaaagcagttcgcagaaattgaaacactgttgatgaaagaatgcgaacaa
gtagagaaaacccgtcagagattttctgcagaacgggctcgtatgctctcagcaagattt
ggatctcctggaggaatctctccacagactaataatctccaaggcatgtctctatccaca
ggtggtaacaacatcaattctctcatgcatcagcaacatcagcaacaacaagcttccgca
acttctcaaccaagcataatcccaggattcagcaacaacccgcaagttcaagcacagatg
catttcatggcacgacaacaacaacaacaacaacaacaacaacaacaacaacagcaagct
ttctcgtttggcccgagattacctctcaatgcaatacagaccaatgcaggatcaacagct
tcaccaaacgtcatgtttggcaacaaccaactaaataaccctgcagcagctggagcagca
tcgatcaaccagccttcgtttagtcacccgatggttaggtcttccacaggttcaggctca
gggtccggcttaggcttaaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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