KEGG   Arabidopsis thaliana (thale cress): AT1G27650
Entry
AT1G27650         CDS       T00041                                 
Symbol
ATU2AF35A
Name
(RefSeq) U2 snRNP auxiliary factor small subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT1G27650 (ATU2AF35A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT1G27650 (ATU2AF35A)
Spliceosome [BR:ath03041]
 Complex A
  U2 snRNP components
   U2 related factors
    AT1G27650 (ATU2AF35A)
 Complex B
    AT1G27650 (ATU2AF35A)
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 839657
NCBI-ProteinID: NP_174086
TAIR: AT1G27650
UniProt: Q9S709 A0A178W2Y4
Position
1:9614551..9616574
AA seq 296 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL
RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR
SSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREEKEEGGA
NT seq 891 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc
tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct
accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct
ggtgttgacgctcagggccaaccactcgacccgcgtaagattcaggagcactttgaggat
ttctttgaggatctttttgaggagcttggaaagtttggcgagatagagagcctcaacatt
tgtgacaaccttgctgaccacatgattggcaacgtatatgttcagtttaaggaagaggat
caggctgcagctgctttgcaggctctgcaaggtaggttctattcaggacgtcccatcatt
gctgatttctctcctgtgacggatttccgcgaagccacgtgtaggcagtatgaagaaaac
aactgcaaccgtggtgggtactgtaatttcatgcatgtgaagcttgtttcgagggaacta
aggagaaaactctttgggagatatcggcgatcataccgcagaggaagtagaagcaggagc
agaagcaggagtattagccccaggaacaagagagataatgaccgacgtgatccttctcac
agggaattcagtcatcgggacagagatcgcgagttttaccgtcatggaagtggaaaaagg
agcagtgagaggtcggagaggcaagagagggacggttcaaggggtaggagacaagcaagc
cctaaacgaggagggagcccgggtggcgggagggaaggaagtgaggagaggagggcaagg
attgagcaatggaacagagaacgggaggagaaggaagagggaggagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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