KEGG   Arabidopsis thaliana (thale cress): AT1G27890
Entry
AT1G27890         CDS       T00041                                 
Name
(RefSeq) Polynucleotidyl transferase, ribonuclease H-like superfamily protein
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AT1G27890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G27890
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AT1G27890
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     AT1G27890
SSDB
Motif
Pfam: CAF1 DUF6642
Other DBs
NCBI-GeneID: 839682
NCBI-ProteinID: NP_174110
TAIR: AT1G27890
UniProt: Q9C6M9 A0A7G2DW67
Position
1:complement(9714136..9715176)
AA seq 302 aa
MGEVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTH
LIQLGFTLFDRRGITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEF
FRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFD
VKKIAESCSGLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNSRKQC
VRRVDHQQYQLEQQQLMMTRCYIPIPIPIPRPRSVMFAAHHPNPYFGGGYFGMPVQGRNY
VL
NT seq 909 nt   +upstreamnt  +downstreamnt
atgggtgaagtttggagatggaacaaggaagtagagatggattcgataagagattgtttg
aaacattttagttccatcgctatcgacacagagtttcccggatgcttaaaggagactccg
atggacgcgagtgaggaaattcgttacagagacatgaagttcaatgtggacaacacccat
ctcatccagttaggtttcacgctattcgacagaagaggaatcactaaaacctgggaaata
aacttgtcagatttcaacgaacataagtgcttcaaaaacgataagtccatagcttttctc
aaaagcaatggtctcaatctggacaagatcggagaggaaggtattggaatcgaagaattc
tttagagacttttctcagattctcaaggagaaggacggaaagataacttgggtgaatttt
caaggctcttacgacaatgcttatctcgttaaaggcttaacgggagggaaaccgttaccg
gagactaaggaagagtttcacgagaccgtcgagcagcttttgggaaagtttgtttttgac
gtaaagaaaatcgctgaatcatgcagcggactaagtagccgattcggactacagagaata
gctgatgtgttgcagatgaaacgtgttggaaaagctcatcacgctggctcagacagtgaa
ttgacggctcgtgtcttcactaagttgactttcgatttgctcaatagtagaaagcagtgt
gtaagacgagttgatcatcagcaatatcaactagagcagcagcagcttatgatgactaga
tgttacatcccaataccgatacctataccgagaccgagatcggtgatgtttgctgctcat
cacccgaacccgtattttggtggtggttactttgggatgccggtccaaggaaggaactac
gttttgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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