KEGG   Arabidopsis thaliana (thale cress): AT2G17250
Entry
AT2G17250         CDS       T00041                                 
Symbol
EMB2762
Name
(RefSeq) CCAAT-binding factor
  KO
K14771  U3 small nucleolar RNA-associated protein 19
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT2G17250 (EMB2762)
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    AT2G17250 (EMB2762)
SSDB
Motif
Pfam: CBF DUF2344
Other DBs
NCBI-GeneID: 816230
NCBI-ProteinID: NP_179316
TAIR: AT2G17250
UniProt: F4IMH3
Position
2:7499472..7503195
AA seq 577 aa
MASILSKKQKKNEKYTLKELKSLGHDLLTSRSHINNLPLLLTFVSPESPPQFVVESLLSL
QSFFTPLLSQLPPTSSSPSSTKTEDPEVVFKAWLRSKFDEFVKLLLDVLVSQQSEDSLRG
IVLGTLMEFVKLLNAGRFHSSIYHRLLDAIIHSEVDIEIFLDILTSKYFKYIDVRYFTYI
SMEKFVKTLEASVSADRTVIENNEAESDSKESLELSVRKIYQVLSQIPPPEKQAEKSQHE
MWSGSDESISEKPTDKKKKTEKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKE
VLASIHLTVIPHLSNPTMLCDFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPFFYEKLY
ALLVPSVFVAKHRAKFLQLLDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALI
YNLLRRNPTINHLVQEIVENADEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSG
ALKSSLWEIDTLRHHYCPPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRR
RVKQVPLAFYKTVPTSLFADSDFPGWTFTIPQEEGTC
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggcgtcaatcctctcaaagaagcagaagaagaacgaaaaatacaccttgaaagagctc
aaatcattaggtcatgacttactcacttctcgatctcacatcaataaccttcctctcctt
ctcaccttcgtctcaccagaatctccgccgcagttcgtcgttgaatcactcctctcactc
caatcctttttcactcctctactctctcagcttcctccgacttcttcgtctccttcttca
accaaaacagaggaccctgaagttgtgttcaaagcttggctcagatcaaaatttgacgaa
ttcgtcaagcttttactcgatgttcttgtctctcaacaatcagaagattctctaagggga
attgtgttgggaacattaatggaatttgtaaagcttttgaatgctggaaggtttcattct
tcaatctaccacagattacttgatgctattattcactctgaggttgatattgagatattc
ttggatatacttacttcaaagtacttcaagtacattgatgtccgctattttacatacatc
agcatggaaaagtttgtgaaaacattggaagcatcagtgtctgctgatagaactgtgatc
gaaaataatgaggctgagagtgattcaaaagaaagcctagaactctctgttcgcaagatc
tatcaagttttatctcaaatcccacctcctgagaaacaagctgagaagtctcaacacgag
atgtggagtgggtcagatgaaagtattagtgagaagccgacagataaaaagaagaaaact
gagaaaggagacagcactctcctttctccggcaacaattagcaagaggatgaagttgaag
ttcactaaagcatggatttcatttctcagactgcctcttcccattgatgtgtacaaggag
gttcttgccagtattcacctgacagtcattccccatctatctaatcctacaatgttatgc
gactttttaacaaaatcgtacgacattgggggtgttgtcagtgtgatggctcttagcagt
ctcttcatcctcatgacccaacatggtttggagtatccgttcttttatgaaaaactgtat
gcgttactggttccttctgtctttgtggcaaagcaccgagcaaaatttcttcagcttctt
gacgcatgcctgaagtcgtcaatgcttccagcatatctggcagcttcattcacaaagaaa
ctaagcagattgtcactttccattccccctgcgggatcgttggtcataacagctttgatc
tacaaccttttacgaagaaatcctacaatcaaccatcttgtgcaggaaatcgttgaaaat
gccgatgaagccaacacagaggctggtgaacacaatgagagccaaccaaagaccatcaaa
aagcgaaagcttggtattgactatttcaacaaccaggagagtgatcccaagaaatctgga
gccttaaaaagttctctttgggagatcgacactttgcgccatcattactgtccaccagtt
tcacggtttatctcatctctagaaactaatctaaccatcagatcgaaaaccacggaaatg
aaaattgaagatttttgctctggttcatatgccaccatatttggggacgagattcggaga
agggtaaagcaagttcctttagcgttctacaaaacggttccaacatctctgtttgcggat
tcagattttcctgggtggacgttcactattccacaagaggaaggcacatgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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