KEGG   Arabidopsis thaliana (thale cress): AT2G29580
Entry
AT2G29580         CDS       T00041                                 
Symbol
MAC5B
Name
(RefSeq) CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT2G29580 (MAC5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT2G29580 (MAC5B)
Spliceosome [BR:ath03041]
 Complex B
  Other components
   Prp19-related factors
    AT2G29580 (MAC5B)
 Complex C
    AT2G29580 (MAC5B)
SSDB
Motif
Pfam: STL11_N RRM_1 Torus zf_CCCH_4 zf-CCCH_2 zf-CCCH_3 zf-CCCH_4 zf-CCCH RRM_3 RRM_occluded
Other DBs
NCBI-GeneID: 817507
NCBI-ProteinID: NP_180518
TAIR: AT2G29580
UniProt: Q9ZW36 A0A5S9X2B5
Position
2:12651826..12654336
AA seq 483 aa
MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR
DARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAE
EHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVL
EQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGR
PQVPKPDQDGSNQQGSVAHSGLLPRAVISQQQNQPPPMLQYYMHPPPPQPPHQDRPFYPS
MDPQRMGAVSSSKESGSSTSDNRGASSSSYTMPPHGHYPQHQPYPPPSYGGYMQPPYQQY
PPYHHGHSQQADHDYPQQPGPGSRPNPPHPSSVSAPPPDSVSAAPSGSSQQSADAAVTTG
SSQ
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggcgcatagaatactgagagatcacgaggctgatggatgggaacgttctgatttccca
atcatctgtgagtcttgtctcggtgacaatccttacgtgagaatgacaaaggcgaattac
gataaagagtgtaagatctgtacccggcctttcacggttttcagatggcgacctggtagg
gatgcgagatacaagaagactgaagtttgtcagacatgttgcaagttgaagaatgtgtgc
caagtttgtctcttggatcttgagtatggtcttccagttcaggtcagagacacggcgctc
aacattagtactcatgattctatcccaaaaagtgatgtgaaccgagagtttttcgctgaa
gagcatgatcgaaagacgagagctggactagattatgagtcttcttttgggaagattcgg
cccaacgataccattcgtatgcttcaaaggacaacgccttactacaaaaggaaccgagct
catatttgtagtttcttcattaggggagagtgtacaagaggtgatgagtgtccataccgt
catgagatgcctgaaacaggagagttatcccagcagaacattaaagaccgttattatggt
gtaaacgatccagttgcgttgaagttacttggcaaggctggggagatgggtactttggaa
tctccagaggatcaaagcatcagaacgctttatgttggtgggctaaactcgagagtcctt
gagcaagacattcgtgatcaattctacgcccatggagaaatcgaatccatcagaatcttg
gctgagaaagcatgtgcgtttgtcacttacacaacccgagaaggagcagagaaagctgca
gaagagctcagtaacaggctagttgtcaacggtcagaggctaaaactcacatggggaaga
cctcaggttcccaaacctgatcaagatggttctaaccaacagggcagtgtggctcatagt
ggtttactacctcgagcagttatatctcagcaacagaatcaacctccaccaatgctacaa
tactatatgcacccaccaccaccacaacctcctcatcaagacagaccattttacccatca
atggaccctcagagaatgggtgcagttagttcgtccaaagaaagcggttcaagcaccagt
gacaacagaggagcttcttcttcttcttacactatgccaccacatggccactatcctcag
caccagccatacccgccaccatcatatggaggatatatgcaaccaccttaccagcagtat
cctccttaccaccatggccattcacaacaagctgatcatgattacccacaacaaccaggt
cccggttcaaggcctaatcctccacatccaagttcagtctctgctccaccacctgactct
gtgtctgcagcaccttcaggatcctctcagcaatctgctgatgctgctgttactactggt
tcgtctcaatag

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