KEGG   Arabidopsis thaliana (thale cress): AT2G38950
Entry
AT2G38950         CDS       T00041                                 
Name
(RefSeq) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ath01009]
    AT2G38950
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT2G38950
Enzymes [BR:ath01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     AT2G38950
Protein phosphatases and associated proteins [BR:ath01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     AT2G38950
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    AT2G38950
SSDB
Motif
Pfam: JmjC JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 818480
NCBI-ProteinID: NP_181429
TAIR: AT2G38950
UniProt: Q8L7T6
Position
2:16260803..16265270
AA seq 708 aa
MGIEGVSTYLKSGNMDTISAPPGFVSQTSFVLRNVPRDKESPRSVSRQEQTTGFGTDDKD
SCNMFLKSRPWIVHGHTIPSSEALRPKKTEVRRRRPLKVSETKVLEEAPVFNPTEEEFRD
TLSYISSLRDRAEPYGICCVVPPPSWKPPCLLKEKQIWEASTFFPQVQLFGIQTENRKIK
KEVDADSNDAASEGVQLCRVERGPGYTLKSFKNFADTYKKSHFGMKDEVLGSENSSPSLK
PNELIVADIEKEYRQIVESPLIEIGVLYGNDLDTATFGSGFPLSAPSESSKYSSGWNLNS
TAKLPGSLLSLEDCESVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGC
HRSKFKAAMKSFILEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGS
YYSAFDCGFNCLEKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAAREAVKCLK
EYGLSKKNTACYTRWNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQRMDKSYDAVN
KRECCVCLGDLYLSAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDELNLLVEAL
EGKKLSSMFRWAGIDQKFCASPATTSSKPEEDKGKETDEVTPCNITRKDVAAGTKDQTRV
KARSLADILNVKDGNNDAKETLESCSKKSNRPCDNDSSEANAPKKQKQ
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgggcattgaaggtgtatcaacgtatttgaaatctggaaatatggacacaatttctgct
ccgccaggttttgtatctcaaacatcgtttgtgctgaggaatgtaccccgagacaaagaa
agtcccaggtccgtgtcgagacaagagcagacaactggattcggcacagatgataaagat
agttgcaatatgtttcttaaaagccgaccgtggatagtgcatggtcacacaattcccagc
tcagaggccttaaggccgaaaaaaactgaggtacggagaagacggcccctcaaagtgtct
gagaccaaagtccttgaggaagctcctgtgttcaacccaaccgaagaggaattcagggac
acactctcatatatatcaagcttgcgtgacagagctgagccgtatggaatctgttgtgtt
gttcctccaccttcatggaaacctccatgtcttctcaaggagaaacaaatatgggaggct
tctacatttttccctcaagttcagctctttggaattcagaccgagaaccgaaagattaaa
aaggaggttgatgcagatagtaatgatgctgcatctgaaggggttcagttatgtagagta
gaacgtggtcctgggtatactttgaagtcctttaaaaactttgcagatacatacaagaag
agtcattttggcatgaaggatgaggttttgggttcagagaactcatctccatcacttaaa
ccaaatgagctaattgtggcagacattgaaaaagagtacagacaaattgttgagagtcca
cttattgaaattggggtgctttatggcaatgatttagacactgcaacgtttggaagtgga
tttcccttatctgcaccatctgaatctagcaaatattcatcaggttggaatctgaacagt
acggctaagcttcctggttctcttctatcattagaagactgcgaatcagtttgtgttcct
cgtctaagtgtaggaatgtgcttgtcttcccagttctggaaatctgagaaggagagactc
tactctctctgctatttgcatgtgggcgctcctagagtgtggtattccgtagcaggatgt
catcgatcaaagtttaaggctgccatgaaaagcttcatccttgagatgtcaggagaacag
ccaaagaagagtcataatcctgtgatgatgatgtctccatatcaattgagcgtggagggt
ataccagtgacccgctgtgtccagcaccctggccagtatgttattatatttccagggtcg
tattactctgcctttgactgtggcttcaactgtttggagaaagcaaactttgctcccctt
gattggttgccccatggggatattgctgttcaggtgaatcaagagatgagtaaaacgtcg
ctgatatcgtatgataagctattatttagtgctgcaagggaagctgtaaaatgtcttaag
gaatatgggttgtcgaagaaaaacacagcatgttacacgagatggaatgattcttgtggg
acggatgggttgttctccaacataatcaagtcacggatcaaactggagaaaaatagacgt
gaatttcttatcagttcactagaatcgcaaaggatggacaagagttatgatgctgtgaac
aaaagggaatgctgtgtatgtcttggggatttgtatctttccgcggttaactgttcatgc
tctgctaatcgttactcgtgtctgaaccacatgaggaagctctgtgcatgtccgtgtgac
agaaagagttttctctataggtacactatggatgagttgaatcttctcgttgaagccctg
gaaggtaaaaagctcagctctatgttcagatgggcaggcatagatcaaaaattctgtgct
tctccagccaccacaagttcaaaacccgaagaagacaaaggcaaggaaacagatgaggtt
acaccctgtaatatcacgaggaaagatgtcgcagctggaactaaggaccagacaagagtg
aaggcgagatctttggctgatatactgaatgttaaagatggaaacaatgatgcaaaggag
actttagaatcttgttctaagaaatcaaacaggccatgcgataacgattcctctgaggcc
aacgcgccaaagaaacagaagcagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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