KEGG   Arabidopsis thaliana (thale cress): AT2G42920
Entry
AT2G42920         CDS       T00041                                 
Name
(RefSeq) Pentatricopeptide repeat (PPR-like) superfamily protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR PPR_2 PPR_1 PPR_3 E_motif Eplus_motif
Other DBs
NCBI-GeneID: 818893
NCBI-ProteinID: NP_001325245
TAIR: AT2G42920
UniProt: Q9SJG6 A0A178VRW9
Position
2:17858655..17863466
AA seq 559 aa
MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA
SRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSP
SVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA
WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK
DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI
DMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSV
SFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKN
MPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEA
VEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSG
FAELFDATTRIGFTYLAEK
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgtctccgacgatcttatccttctccggtgtgacggtgccggcgatgccgtcatcaggt
tccctctccggcaacacttatctccgattgatagacacacaatgtagtacgatgagagaa
cttaagcaaatccacgccagtctcatcaaaaccggtttaatttccgatactgttaccgcg
agccgtgtcctcgccttctgctgtgcgtctccgtcagacatgaattacgcttatttggta
ttcactaggatcaatcacaagaacccatttgtctggaacactataatccgtggtttctca
cggagctcgtttccagagatggctatttcgattttcattgacatgttgtgttcttctccg
tctgtgaagccgcagagattgacttatccttcggtgttcaaagcttatggtagacttggc
caagctcgtgatgggaggcaattacatgggatggttattaaagagggacttgaagacgac
tcgtttatacggaatacgatgttgcatatgtacgtgacttgtgggtgtttgattgaagct
tggagaatctttctggggatgataggttttgatgttgttgcttggaattcaatgattatg
ggttttgcgaaatgtggattgattgatcaggcgcagaacctgtttgatgaaatgccgcag
agaaatggagtttcttggaattcgatgattagtgggtttgtgaggaatggtagatttaag
gatgcgttggatatgtttcgagagatgcaggagaaagatgtgaaacctgatgggtttaca
atggtgagtctgttgaatgcttgtgcgtaccttggagcaagtgagcaagggagatggata
catgagtacatagtgaggaatcggtttgaattgaatagtatagttgttacagcactcata
gatatgtactgtaagtgtgggtgcattgaggaaggtctaaatgtgtttgagtgtgctcct
aagaagcagttatcgtgttggaattcgatgattcttggtctagctaataacggattcgag
gaaagggccatggatttgttctcggagttagagcgttctggcttggaaccagattcagtc
agcttcattggtgttttaacagcttgtgctcactccggggaagtacatagagctgatgaa
tttttcagattgatgaaagaaaaatatatgattgagccatcaataaaacactatacttta
atggttaatgtgctgggtggagcggggctcctcgaagaagcagaagcattgataaagaat
atgccggtggaagaagacactgttatatggagttctttgctttctgcctgcaggaaaatc
ggtaatgttgagatggctaaacgagcagcaaaatgtttgaagaagctcgatccagatgaa
acgtgtggttatgttctcttgtctaatgcttatgcttcttatggcttgttcgaagaggca
gttgagcagaggcttttgatgaaggaaagacaaatggagaaagaagttggctgcagttcg
attgaagtggattttgaagttcatgagtttatatcttgtgggggaacgcatcctaaatcc
gcagagatttacagtttactcgatatcttaaactgggatgtctctacaattaaatcaggt
ttcgctgaattgtttgatgctacaactaggattggtttcacttatctggcagagaaataa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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