KEGG   Arabidopsis thaliana (thale cress): AT3G13672
Entry
AT3G13672         CDS       T00041                                 
Name
(RefSeq) TRAF-like superfamily protein
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT3G13672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT3G13672
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT3G13672
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    AT3G13672
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF FAIM1
Other DBs
NCBI-GeneID: 820573
NCBI-ProteinID: NP_187978
TAIR: AT3G13672
UniProt: Q93WE4 A0A178V5T3
Position
3:complement(4472562..4474378)
AA seq 216 aa
MEPRINDLQVESRVHELLDFPVHTNQISSAIYECPNDHIENPKKKPYNCPHSGAKCDVTG
DIQRLLLHLRNDHNVEMSDGRSFSHRYVHHDPKHLHHATWMLTLLDCCGRKFCLYFEAFH
LRKTPMYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLTWQGVPRSIRDSHKTVRDSQDGLI
ITRKLALFFSTDNNTTDKELKLKVSGRVWREQPVSI
NT seq 651 nt   +upstreamnt  +downstreamnt
atggaacctcgaatcaatgaccttcaggtggaatctcgggttcatgagttgctcgatttt
ccggttcatacaaaccagatatcctctgcaatctacgagtgtcccaacgaccacatcgaa
aaccctaagaagaaaccgtacaattgtccacactcaggagccaagtgtgatgtcacagga
gatattcaaaggctactactgcatctaaggaatgatcacaatgttgaaatgagtgatggg
cgtagtttcagtcacagatatgttcatcatgatcctaaacatcttcatcatgctacttgg
atgttaacacttctcgattgttgtggtcgaaaattctgcttgtacttcgaagcgtttcac
ctgaggaaaacaccaatgtacatggccttcatgcagtttatgggagatgaagaagaggca
atgagcttcagctatagtttgcaggtcggagggaatggcagaaagctgacatggcaaggc
gtgccgaggagcattcgtgacagtcacaagacggttcgtgatagtcaagatggcttaatc
atcactcgcaaattggctttgttcttctctaccgacaacaacaccaccgacaaggagctg
aagttgaaggtttcaggtcgtgtatggagagaacagcctgtttcgatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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