KEGG   Arabidopsis thaliana (thale cress): AT3G53190
Entry
AT3G53190         CDS       T00041                                 
Name
(RefSeq) Pectin lyase-like superfamily protein
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00040  Pentose and glucuronate interconversions
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AT3G53190
Enzymes [BR:ath01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     AT3G53190
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 824485
NCBI-ProteinID: NP_566979
TAIR: AT3G53190
UniProt: Q9SCP2 Q56XU8
Position
3:19713799..19717740
AA seq 483 aa
MMLQRSCIVLFFSLFLLVPQMVFSMLNRTLLLIPHPDPELVAYQVQWKVNASITRRQALD
TTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSD
DDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCI
TLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLS
RCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQR
MPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGD
WKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRN
NNLGMWTTTGSEGTSGLDSYNDYTDEMSGAGSTNRLSFSVLVFLLSSISYLVVFTSSTQM
FML
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgatgcttcaaagaagctgcattgtacttttcttctctctttttctgttggttccacaa
atggttttctcgatgctcaacagaactcttcttctcataccacatcctgacccggaacta
gtcgcttatcaagttcagtggaaagtaaatgcatctataacaaggcgtcaagctctagac
acgacggaccaggccggttcgaccccgtgtatcaccggtaacccaatcgatgactgttgg
aaatgtgacccaaactggcccaataacagacaaggtctagcagattgtggtatcgggttc
ggacagtacgcgttgggaggcaaaggtggtcagttttactttgtcactgattcttccgac
gatgatgccgtcaaccctaaaccgggcactctcagatatggggtgatacaagaagagcca
ttgtggatagtgttcccaagcaacatgatgattaaactaaagcaagagctaatattcaat
agttacaagacacttgatgggagaggagctaatgttcacattgttggtggtggctgcatc
actcttcaatatgtctccaatatcatcattcacaacatccatatccaccattgttaccaa
tccgggaatactaacgtgcggtcaagtccaacgcactatgggttcagaacgaaatcggac
ggtgatggtatctctatattcggatcaaaggacatttggatcgaccattgttctctatcg
agatgcaaggacggtctgatagatgcggtaatgggttccacaggaataactatatcgaac
aacttcttctctcaccataatgaagtcatgcttcttggtcacagcgaccactatgaacca
gacagtggcatgcaggtaacaattgcgtttaatcactttggagagaaattgatacaaagg
atgccgaggtgtcgacgtggatatatccatgtggttaataacgattttactcaatgggaa
atgtatgccattggcggtagcggtaacccgactattaacagtcagggtaaccgctacacc
gccccaaccaacccgtttgccaaggaggtgacaaagagagtggaaacaccggatggtgat
tggaaagggtggaattggagatcggagggggacattttggtgaatggagccttcttcgtg
gcatccggggaaggtgcggaaatgaggtatgagaaggcatatagcgtcgagcctaaatcc
gcctcattcatcacccaaatcacatttcactctggtgttcttggcgttggtggcaggaat
aacaatctggggatgtggactactactggatcggaaggtactagcggtttagattcttat
aatgactataccgatgaaatgtctggcgctggttcaaccaaccggttatctttttcagtt
cttgttttcttgctaagttcgatatcatatttggtcgtgttcacttcttcaacccaaatg
tttatgttgtaa

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