KEGG   Arabidopsis thaliana (thale cress): AT3G53920
Entry
AT3G53920         CDS       T00041                                 
Symbol
SIGC
Name
(RefSeq) RNApolymerase sigma-subunit C
  KO
K03093  RNA polymerase sigma-I factor
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT3G53920 (SIGC)
Transcription machinery [BR:ath03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AT3G53920 (SIGC)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 GPW_gp25
Other DBs
NCBI-GeneID: 824559
NCBI-ProteinID: NP_190960
TAIR: AT3G53920
UniProt: O24621
Position
3:complement(19960789..19963980)
AA seq 571 aa
MASFNSFPIPKQIVGSSSSSSSSTSRPRILVRSSLTSSMTSTNSMLVFVHPHPLIKHWLS
LLRSDQTSFPIFVRIPMTSVVATRWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNV
YVELKDPKENIGVGSAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGK
LGAAELFKTCLSRYRGSSITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENG
DQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEE
ESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHED
LIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHI
QKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEF
TPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKV
SKEWIRKIERRAMAKLRDQPNAEDLRYYLNQ
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggcttccttcaattcgttccccattcccaaacagattgttggttcttcttcttcgtcg
tcctcctctacttctcggccacgtattttagtgcgatcgagtttaacatcgtctatgacc
tctaccaatagtatgctggtctttgtacatcctcatcctttgattaaacattggctctcg
ttattgagatctgaccaaacttctttccccattttcgttagaattccaatgacttctgtg
gttgcaacgaggtggtcgtttctatcctcagtcaaagaggaaagcagaatttatcagaac
gattctctaaaagcatgtggctgcgcatctgtatctccttacactgcacaaaataatgtt
tatgttgagctcaaagacccaaaggaaaatattggcgtgggttctgcagaaagatcatat
tcatctcgtagcatgttgcaatacaatttactggcaaagaaccttttggcactagaggaa
acgtttgttgccttggattctgtaagaatggaaagagatattatgttgcaaatggggaag
ttgggggctgctgagttatttaaaacctgtctatctaggtatcgtggttcctcaatcacg
tcgtgcttatctgacacaactgagttggtggatactacgccgaatcaacaagtctttgta
tcctcgaggagaaaagtaaaaaagaaagcaaggaggtcgagtgtgacagctgagaatggt
gatcagagttctctgccaatcggtttaagaactacatggaacaatattgatgtccctaga
gtgagaagaccaccaaaatatagaaagaaaagagagaggatctctagaaacgagactgag
atgtcaacaggagtcaagatagtggcggacatggagagaatcagaacacaactggaggaa
gaaagtggtaaggtagcgagtttgagttgttgggctgcagcagctgggatgaacgagaaa
ctcctgatgcgcaatctacattacggttggtactgtagagatgaactggtgaaaagcacc
cggtctttggttctcttcctcgcaagaaattaccgtggactgggaatcgcccacgaagat
ttaattcaggcagggtatgtgggggtgttacaaggagcagagaggtttgatcacacaagg
ggttacaagttttcaacatatgtgcagtattggataagaaaatcaatgtctacgatggtg
tcacggcatgcaagaggcgtccatattccttcatcaataatccgaactatcaatcatata
caaaaggctcgtaagaccctgaaaacgagccatggtataaaatatgcggctgatgaggag
attgcaaaactaacaggccactcggtgaagaagattcgagcagctaaccaatgcctaaaa
gtggtcggttcaattgacaagaaagttggggattgctttactacaaaattcctggaattt
acaccagacacaacgatggagagtcctgaggaggccgtgatgaggcagagcgcgaggaga
gacatacatgatcttctagaagggttagagccaagagagaagcaagtgatggtcctacgt
tatggtcttcaagactacaggcccaagtccctggaagagattgggaagcttcttaaagtt
agcaaagaatggattcggaagatcgaacggagagcaatggctaaactcagagaccaaccc
aacgccgaagacctcagatattatttgaatcagtaa

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