KEGG   Arabidopsis thaliana (thale cress): AT5G01530
Entry
AT5G01530         CDS       T00041                                 
Symbol
LHCB4.1
Name
(RefSeq) light harvesting complex photosystem II
  KO
K08915  light-harvesting complex II chlorophyll a/b binding protein 4
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00196  Photosynthesis - antenna proteins
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09102 Energy metabolism
   00196 Photosynthesis - antenna proteins
    AT5G01530 (LHCB4.1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:ath00194]
    AT5G01530 (LHCB4.1)
Photosynthesis proteins [BR:ath00194]
 Antenna proteins
  Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
   LHCII
    AT5G01530 (LHCB4.1)
SSDB
Motif
Pfam: Chloroa_b-bind
Other DBs
NCBI-GeneID: 830325
NCBI-ProteinID: NP_195773
TAIR: AT5G01530
UniProt: Q07473 A0A384LC70 Q0WW97
Structure
Position
5:208866..210548
AA seq 290 aa
MAATSAAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYP
GAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAK
STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL
GQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQL
AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
NT seq 873 nt   +upstreamnt  +downstreamnt
atggccgcaacatccgccgctgctgcagctgcttcttccatcatgggtactcgggtggct
cccggtatccatcccggttcaggtcggttcacagccgtgttcggtttcggaaagaagaag
gcagctcccaaaaagagtgccaaaaagacggtgactacggaccggcctctttggtaccca
ggcgccatttctcctgactggcttgatggttccttggttggagattacggttttgatccc
ttcggtttaggcaaaccggccgagtatcttcaattcgatatcgattcactagaccagaat
ctggctaagaacttggccggagacgtgatcggaacccgtacggaagctgccgacgccaaa
tcgacgccgtttcagccgtacagtgaggtgttcggaatccagagattcagggaatgcgaa
ctcatccacggacggtgggcgatgctcgctactctcggcgctctctccgtcgaatggctt
accggcgttacatggcaagacgctggcaaggtggagcttgtagatggatcgtcctacttg
gggcagccattacctttctcgatctcgacattgatatggatcgaggtgttagtgatcggc
tacatcgagttccagcgcaacgccgagcttgattcggagaagcgtttataccccggaggc
aagttctttgacccgctaggtttagcggctgacccggagaagactgctcaacttcagtta
gctgagatcaagcatgcacgtcttgcgatggtcgccttcttgggattcgcggttcaagcg
gctgcaacaggtaaaggtccactcaacaattgggctactcacctcagtgatccactccac
accaccatcatcgataccttctcctcatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (8)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system