KEGG   Arabidopsis thaliana (thale cress): AT5G06420
Entry
AT5G06420         CDS       T00041                                 
Name
(RefSeq) Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
  KO
K13127  RING finger protein 113A
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT5G06420
Spliceosome [BR:ath03041]
 Complex C
  Other components
   Complex C specific factors
    AT5G06420
SSDB
Motif
Pfam: zf-CCCH zf-C3HC4_3 zf_CCCH_4 zf-RING_5 zf-RING_2 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-CCCH_4 zf-CCCH_2 zf-RING_10
Other DBs
NCBI-GeneID: 830530
NCBI-ProteinID: NP_196260
TAIR: AT5G06420
UniProt: Q9FNG6 A0A5S9Y1W5
Position
5:1960681..1963040
AA seq 378 aa
MEPFVVKENIVASASSPMKKRRIDHTESADGSAINASNSSSIGGNDTVMNMAEFGNDNSN
NQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYFSSGP
STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKADHALKG
NKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARFDYQPDI
CKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVEDDDDEADKD
SDEDENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAA
HEIKKRMAEERSKAEQGL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggaaccattcgttgttaaggagaacatcgtcgcatccgcttcttcgccgatgaagaag
cgacggatcgatcacactgagtcagctgatggttctgcgattaacgcttctaactctagt
agcatcggtggtaacgatacggtgatgaacatggcggagtttggtaacgacaactccaac
aatcaggagtctcaacaagtttgcactttcttcaagaagccaacgaaaagtaaaaacata
aggaaaagaaccattgacgctgatgaagaagacggagattcgaaaagcgaaagctctatt
ttacaaaatctaaagaaagttgcaaaacccgatagcaacttgtacttttcttctggacca
tctactagaacgagtggagctcctgagagacccgtttttcactacgattcatccaaggaa
atccaggttcagaacgacagtggagcaacagcgacccttgaaactgaaaccgacttcaat
caagacgctcgagctatccgtgaaagagttcttaaaaaagcagaccatgcattgaagggg
aataagaaaaaggcttcagatgagaagctgtacaaaggaattcatggatatacagatcac
aaagctgggtttagaagagaacaaacaatctcgagcgagaaagctggaggctcacacggg
cctttaagagcttctgctcacatcagagtatcggctagattcgattaccagccagacatt
tgcaaggattacaaggaaaccggatactgtggatatggagattcgtgtaagttcttgcat
gaccgtggggattacaagccgggatggcagatagagaaagagtgggaagaggcagagaaa
gttaggaagagaaataaagctatgggagttgaggatgacgatgatgaggctgacaaggat
agcgacgaagacgaaaatgcattgccctttgcttgcttcatttgcagggagccttttctt
gatccagttgtcaccaaatgcaagcattacttctgtgagcattgtgctttaaagcatcac
acgaagaacaagaaatgctttgtgtgtaaccaaccaacaatggggattttcaatgcagca
catgagatcaagaagagaatggctgaagaacggagtaaagctgaacaaggattgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (51)   

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