KEGG   Arabidopsis thaliana (thale cress): AT5G12440
Entry
AT5G12440         CDS       T00041                                 
Name
(RefSeq) CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH RRM_1 Torus zf-CCCH_2 zf-CCCH_4 RNA_bind PABP
Other DBs
NCBI-GeneID: 831119
NCBI-ProteinID: NP_001332068
TAIR: AT5G12440
UniProt: Q94CJ8 A0A5S9Y460
Position
5:complement(4035181..4042254)
AA seq 650 aa
MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL
LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFRRNSPSSPSSTSPWSFNNC
INGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDCLSFLD
DSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFVSGDDGFGGGCKPCVYFSRGL
CKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLAYQQQRLASQILGR
APQLPYEKRMDFLLQQHAQRDGGLPFGDERFWSSSPGRLERMELAMHLGDQSNSASRQIY
LTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFI
CDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYE
RREMMRRKIEQADLLRAIELERRRFINLQLPEFKNSVTLNHHRSFSVGSPGYFSSAGNQS
PDFQSELNGADALKVTDDTLELHPYPVVNPMSVNNSYSNGAKEETNKSELLDPDSGSTIE
LVLPSNLFPSASSTDDHKTDDSAETNAKVGVSSTNENDHEPPVTTNNLMQ
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggattccggtgacgcgacatctttgcttttgacgaaaattcgaagcttggagccagat
tatgctcctaagattattgggtatttgcttttacatgattttggtgatagagacttgatg
catctggctcgtggacctgaatcgattttgcagtcgactatttcgaaagtgaagagtctc
ttggggattttctccaacaactcgccttcttctactccgacgtctccttctccgttgaat
cctatctgtcgtcctcctcttaacggaagaggaagctctcactccaatgggtttatggat
ttccgtagaaactctccgtcttctccttcttctacctctccttggtcattcaacaactgt
atcaacggtaataatgggaataacccccacatttcccctaaacacactccgatctcgaaa
ccctttagctctcaccaaagcaatggactttctgctacacattctggtagtgctgacgct
gctggtggtgctgatttacttgatgatcagcagcttaatgattgcctttcgtttctcgac
gattcttgttctaaaaccgaggatcttgtggatcctagcattcctttggattactctgta
gatggtgatggtgaaacccatctgcacaggaggagtttctcttgtgatgcgtcttttgtg
tccggagatgatggatttggtggtggatgcaaaccatgtgtgtattttagtagaggtttg
tgcaagaatggagaaagctgcaagtttatccacggtggatatccggataatatggatggt
aatggcattgtcgctgactcgcctaggaaaatggagaactttgttaggcagcacgaggag
atgatgaggctgaaattggcttaccagcagcagaggttggcttctcaaatcctgggtcgg
gctccccagttgccatacgagaaaagaatggactttctcttgcagcagcatgctcaaaga
gatggtggactgccttttggtgatgaaagattttggagcagcagcccaggacggcttgag
aggatggagctggcaatgcatttaggtgatcagtcaaattcggcatctagacagatttac
ttgacattcccagctgacagcacgtttaaggatgaggatgttgctacatatttcagcctc
tttggaacagtccaagatgtgcggatcccataccaacagaagcgtatgtttggctttgtt
tcatttgctcatcccgagacagtgaaagttgtactagctagagggaatccccatttcatt
tgcgactcacgggttcttgtcaaaccttacaaagaaaaaggcaaagtcttggacaagaag
caacagcaactgctacaacagcagattgagcgaggaaattactccccgtgctccagtcca
tctgggattgatcctagagaacagtctgatttccaccttggttcaaagatgttgtatgag
agacgtgagatgatgagaaggaaaatagagcaggctgatctcctgagggctattgaactc
gaaagaagacgtttcattaatttacagcttcctgagttcaagaatagtgtaacgctgaat
catcaccgtagcttttctgtggggtctcctggttatttttcatctgccggcaatcaaagc
cctgattttcaatctgaacttaacggtgcagatgctttaaaagtaactgatgataccttg
gagctgcatccttacccagtagtcaacccaatgagtgttaacaatagctactcaaacggt
gcaaaagaagagactaacaagagtgaattgcttgatcccgattctggaagcaccattgag
cttgttcttcctagtaacctcttcccttctgcatcatctaccgatgatcacaaaaccgat
gattctgctgaaactaatgcaaaagttggagtctcctctactaatgaaaatgaccatgaa
ccaccagtcactaccaataatctgatgcagtag

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