KEGG   Arabidopsis thaliana (thale cress): AT5G12850
Entry
AT5G12850         CDS       T00041                                 
Name
(RefSeq) CCCH-type zinc finger protein with ARM repeat domain-containing protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: Ank Ank_2 Ank_3 Ank_5 Ank_4 zf_CCCH_4 zf-CCCH zf-CCCH_4 Torus
Other DBs
NCBI-GeneID: 831125
NCBI-ProteinID: NP_196789
TAIR: AT5G12850
UniProt: Q9LXV4 A0A5S9Y4E9
Position
5:4056086..4059580
AA seq 706 aa
MCGLAKKLDIEDTLTSLSDQENESLAKPMNDAAEWEHSFSALLEFAADNDVEGFRRQLSD
VSCINQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLDVVKFILSFPEAELNLSCGPDKS
TALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRPVDVLVVSPHAPGLRTILEEILK
KDEIISEDLHASSSSLGSSFRSLSSSPDNGSSLLSLDSVSSPTKPHGTDVTFASEKKEYP
IDPSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTC
VPCPDFKKGSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELRP
LYPSTGSGLPSPRASSAVSASTMDMASVLNMLPGSPSAAQHSFTPPISPSGNGSMPHSSM
GWPQQNIPALNLPGSNIQLSRLRSSLNARDIPSEQLSMLHEFEMQRQLAGDMHSPRFMNH
SARPKTLNPSNLEELFSAEVASPRFSDQLAVSSVLSPSHKSALLNQLQNNKQSMLSPIKT
NLMSSPKNVEQHSLLQQASSPRGGEPISPMNARMKQQLHSRSLSSRDFGSSLPRDLMPTD
SGSPLSPWSSWDQTHGSKVDWSVQSDELGRLRKSHSLANNPNREADVSWAQQMLKDSSSP
RNGNRVVNMNGARPLTQGGSSVNPHNSDTRESDILDAWLEQLHLDR
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgtgtggtcttgctaagaagctggatatagaggatactttgacatcactgtcagaccaa
gagaatgaatctttggccaaacccatgaatgatgctgctgaatgggaacattcgttttct
gccttgcttgagtttgctgcagacaacgatgtggaggggtttaggcggcaactctctgat
gtgtcttgtatcaaccagatgggtctttggtacagacggcagaggtttgttagaagaatg
gttcttgagcaaagaaccccgctgatggttgcttcgttatatgggagtttagatgttgtg
aagtttattctttctttcccggaagcggagttgaatctgtcttgtggtcctgataaaagt
actgctcttcattgcgctgcttctggtgcttctgtgaattccttggatgttgtcaagttg
cttttgagtgtaggagcagatcctaatatccctgatgctcatggaaatcgtcctgttgat
gttcttgttgtgtctccacacgctcctggtttgagaaccatccttgaagagatcttgaag
aaagacgagattatatctgaagatctgcatgcctcgtcatctagcttgggatcaagtttc
cggtctctctcatcatcccctgataatggttcctcgttactctccttagattcagtatcc
tctccgactaagccacacggtactgatgtaactttcgcatcagagaagaaagagtaccca
attgatccatcattgcctgatatcaaaagcgggatttattcaaccgatgagtttcgtatg
ttctcgttcaagatccgcccatgttctcgagcatattcccatgactggactgaatgtcca
tttgcacacccaggtgagaatgcaaggagaagagacccgaggaagtttcactatacgtgt
gttccatgcccggattttaagaaaggatcctgtaagcaaggtgatatgtgtgaatatgct
catggggtttttgaatgctggctacaccctgctcagtacagaacacgattgtgcaaggac
ggaatgggttgcaaccgaagggtttgcttctttgctcacgcaaatgaggagttgcgtccc
ttgtacccttccacaggatctggattgccatctcctcgggcttcgtctgctgtttccgcc
tctactatggacatggcgtcagttttgaacatgttaccaggctcaccatctgctgctcaa
cattcgttcaccccaccaatatctccttctggaaatggtagtatgccccattcatcgatg
ggttggcctcagcagaacataccggcgttgaatcttcctggaagcaatatccagttgagt
cgtctgagatcttctcttaacgctagagatattccttctgagcagcttagcatgctgcat
gagtttgaaatgcaacgtcagcttgctggcgatatgcacagtccacgctttatgaatcat
tccgctcgtcctaagacactgaacccttcaaatctggaggaactcttctcagctgaggtt
gcatctcctcgtttctctgatcaacttgctgtttcatctgttctatcgccttcccacaag
tccgcgcttcttaatcagctgcagaataataagcagagcatgctttctcctatcaagaca
aatctaatgtcttctccaaagaatgtggagcaacattctcttctgcagcaagcctcgtca
ccccgaggcggagagcctatttccccaatgaatgctcgaatgaaacagcagctacattca
cgcagcctaagctcccgtgattttggatctagtctgccccgtgatttaatgccgactgat
tctggttcgccattaagtccatggtcaagttgggaccagacccatggaagcaaggtggat
tggtcagtccaatcagatgagttaggtcggttgagaaaatctcattccttggctaataac
ccaaacagggaagcagatgtttcatgggctcagcagatgttaaaagactcttcatcacct
aggaacggaaaccgtgttgtgaacatgaatggtgcaaggccattgactcaaggtggttcg
agtgtgaatcctcacaacagtgacactcgtgagagcgacattcttgatgcgtggcttgaa
cagctgcacctagatcgctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (36)   

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