KEGG   Arabidopsis thaliana (thale cress): AT5G14660
Entry
AT5G14660         CDS       T00041                                 
Symbol
PDF1B
Name
(RefSeq) peptide deformylase 1B
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    AT5G14660 (PDF1B)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     AT5G14660 (PDF1B)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-GeneID: 831318
NCBI-ProteinID: NP_001332718
TAIR: AT5G14660
UniProt: Q9FUZ2 A0A654G1P3
Structure
Position
5:complement(4726641..4728746)
AA seq 273 aa
MAVCNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVK
RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD
GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE
VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE
ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR
NT seq 822 nt   +upstreamnt  +downstreamnt
atggccgtctgtaactgcttcctccaagctccaccactctctcgcatactcctaccggtt
ttatctcgccgagctactactctctctgccggttatggtcggctcaaatccacggtcacg
ttctgctctactgtgaaccggaccagtcctctgacatcttcggtccgcgcagaagtaaag
cgcgtctcgcgtaaagacgataaagtagcttcagctactgatgttcaatttgagacgcct
ttgaagattgttgagtatccggatcctatactacgggctaagaacaagaggattgatatt
tttgacgagaatttaaagaacttggttgatgctatgtttgatgttatgtacaaaacggat
ggcattgggctctcagcaccacaagtaggtctcaatgttcaactcatggtgtttaatcca
gctggagagcctggagaaggaaaagaaattgtccttgtaaatccgaaaatcaagaaatat
tccgataaattagtaccgtttgatgaaggatgcctctccttcccggggatctatgctgaa
gttgttcgaccacaatctgtcaagattgatgcaagggatattactggtgaaagattttca
atcagtctatcacgtttacctgcacgaatctttcagcacgaatacgaccatctggaggga
gttctcttctttgacagaatgacggatcaagttcttgatagcattcgtgaagagctagag
gccctagaaaagaagtacgaagaaaaaactggattgccaagccctgaaagagtagaagca
cgacaaaaaaggaaagcaggagttggttttggcaaacgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
3D Structure (11)   
   PDB (11)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

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