KEGG   Arabidopsis thaliana (thale cress): AT5G15800
Entry
AT5G15800         CDS       T00041                                 
Symbol
SEP1
Name
(RefSeq) K-box region and MADS-box transcription factor family protein
  KO
K09264  MADS-box transcription factor, plant
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ath03000]
    AT5G15800 (SEP1)
Transcription factors [BR:ath03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box regulators of differentiation, Homeotic genes
    AT5G15800 (SEP1)
SSDB
Motif
Pfam: SRF-TF K-box
Other DBs
NCBI-GeneID: 831436
NCBI-ProteinID: NP_568322
TAIR: AT5G15800
UniProt: P29382 Q5XXN8
Position
5:complement(5151334..5154253)
AA seq 251 aa
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL
NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS
HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGYDNPVCSEQITATTQAQAQ
QGNGYIPGWML
NT seq 756 nt   +upstreamnt  +downstreamnt
atgggaagaggaagagtagagctgaagaggatagagaacaaaatcaacagacaagtaacg
tttgcaaagcgtaggaacggtttgttgaagaaagcttatgaattgtctgttctctgtgat
gctgaagttgctctcatcatcttctccaaccgtggaaagctctatgagttttgcagctcc
tcaaacatgctcaagacacttgatcggtaccagaaatgcagctatggatccattgaagtc
aacaacaaacctgccaaagaacttgagaacagctacagagaatatctgaagcttaagggt
agatatgagaaccttcaacgtcaacagagaaatcttcttggggaggatttaggacctttg
aattcaaaggagttagagcagcttgagcgtcaactggacggctctctcaagcaagttcgg
tccatcaagacacagtacatgcttgaccagctctcggatcttcaaaataaagagcaaatg
ttgcttgaaaccaatagagctttggcaatgaagctggatgatatgattggtgtgagaagt
catcatatgggaggaggaggaggatgggaaggtggtgaacagaatgttacctacgcgcat
catcaagctcagtctcagggactataccagcctcttgaatgcaatccaactctgcaaatg
gggtatgataatccggtatgctcagagcaaataactgcgacaacccaagctcaggcgcag
cagggaaacggttacatcccggggtggatgctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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