KEGG   Arabidopsis thaliana (thale cress): AT5G17920
Entry
AT5G17920         CDS       T00041                                 
Symbol
ATMS1
Name
(RefSeq) Cobalamin-independent synthase family protein
  KO
K00549  5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00270  Cysteine and methionine metabolism
ath00450  Selenocompound metabolism
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
ath01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    AT5G17920 (ATMS1)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    AT5G17920 (ATMS1)
Enzymes [BR:ath01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.14  5-methyltetrahydropteroyltriglutamate---homocysteine S-methyltransferase
     AT5G17920 (ATMS1)
SSDB
Motif
Pfam: Meth_synt_2 Meth_synt_1 TM1586_NiRdase
Other DBs
NCBI-GeneID: 831660
NCBI-ProteinID: NP_001078599
TAIR: AT5G17920
UniProt: O50008 A0A654G2F8
Structure
Position
5:5935038..5939865
AA seq 765 aa
MASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSN
TFAHYDQVLDTTAMLGAVPPRYGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYI
VPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFELLSL
LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLV
ETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWA
NDFAASLSTLQALEGIVGKDKLVVSTSCSLLHTAVDLINETKLDDEIKSWLAFAAQKVVE
VNALAKALAGQKDEALFSANAAALASRRSSPRVTNEGVQKAAAALKGSDHRRATNVSARL
DAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVVDLQEE
LDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTV
FWSAMAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIG
VIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSI
IDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLA
VLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQLASAK
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggcttcacacattgttggatacccacgtatgggccctaagagagagctcaagtttgca
ttggaatctttctgggatggtaagagcactgctgaggatcttcagaaggtgtctgctgat
ctcaggtcatccatctggaaacagatgtctgccgctgggactaagttcatccctagcaac
acctttgctcactacgaccaggttcttgacaccaccgccatgctcggtgctgttccacct
aggtatggatacactggtggtgagatcggccttgatgtttacttctccatggctagagga
aatgcctctgtgcctgccatggaaatgaccaagtggttcgacaccaactaccattacatc
gtccctgagttgggccctgaggttaacttctcttacgcatcccacaaggcggtgaatgag
tacaaggaggccaaggctcttggtgttgacaccgtccctgtacttgttggcccagtctct
tacttgctgctttccaaggctgccaagggtgttgacaagtcattcgaacttctttctctt
ctccctaagattctcccgatctacaaggaagtgattaccgagcttaaggctgctggtgcc
acctggattcagcttgacgagcctgtccttgttatggatcttgagggtcagaaactccag
gcctttactggtgcctatgctgaacttgaatcaactctttctggtttgaatgttcttgtc
gagacctacttcgctgatatccctgctgaggcatacaagaccctaacctcattgaagggt
gtgactgcctttggatttgatttggttcgtggcaccaagacccttgatttggtcaaggca
ggtttccctgagggaaagtacctctttgctggtgttgttgatggaaggaacatctgggcc
aacgactttgctgcgtccctaagcaccttgcaggcacttgaaggcattgttggtaaagac
aagcttgtggtctcaacctcctgctctcttctccacaccgctgttgatcttatcaatgag
actaagcttgatgatgaaatcaagtcatggttggcgtttgctgcccagaaggtcgttgaa
gtgaacgctttggccaaggctttggctggtcagaaggacgaggctcttttctctgccaat
gctgcggctttggcttcaaggagatcttccccaagagtcaccaacgagggtgtccagaag
gctgctgctgctttgaagggatctgaccaccgtcgtgcaaccaatgttagtgctaggcta
gatgctcagcagaagaagctcaatctcccaatcctaccaaccacaaccattggatccttc
ccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctcagag
gaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagaggaa
cttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtacttt
ggtgagcagttgtctggttttgccttcactgcaaacggatgggtccaatcttatggatct
cgctgtgtgaagccaccagttatctatggtgatgtgagccgtcccaaggcaatgaccgtc
ttctggtccgcaatggctcagagcatgacctctcgcccaatgaagggtatgcttactggt
cccgtcaccattctcaactggtcctttgtcaggaacgaccagcccaggcacgaaacctgt
taccagatcgctttggccatcaaggacgaagtcgaggatcttgagaaaggtggaatcggt
gtcattcagattgatgaggctgcacttagagaaggactaccactcaggaaatccgagcat
gctttctacttggactgggccgtccactccttcagaatcaccaactgtggagtccaagac
agcacccagatccacactcacatgtgctactcccacttcaatgacatcatacactccatc
atcgacatggatgctgatgtcatcaccattgagaactccaggtctgatgagaagcttctt
tccgtgttccgtgaaggagtgaagtacggtgctggaatcggtccaggagtctacgacatc
cactctccaagaataccatcttctgaggaaatcgcagacagggtcaacaagatgcttgct
gtcctagagcagaacatcctttgggttaaccctgactgtggtctcaagacccgtaagtac
accgaggtcaagcctgcactcaagaacatggttgatgcggctaagctcatccgctcccag
ctcgccagtgccaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (10)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
3D Structure (4)   
   PDB (4)   
Protein domain (3)   
   Pfam (3)   
All databases (50)   

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