KEGG   Arabidopsis thaliana (thale cress): AT5G27840
Entry
AT5G27840         CDS       T00041                                 
Symbol
TOPP8
Name
(RefSeq) Calcineurin-like metallo-phosphoesterase superfamily protein
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AT5G27840 (TOPP8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ath01009]
    AT5G27840 (TOPP8)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT5G27840 (TOPP8)
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT5G27840 (TOPP8)
   03041 Spliceosome [BR:ath03041]
    AT5G27840 (TOPP8)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     AT5G27840 (TOPP8)
Protein phosphatases and associated proteins [BR:ath01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     AT5G27840 (TOPP8)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     AT5G27840 (TOPP8)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     AT5G27840 (TOPP8)
Spliceosome [BR:ath03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    AT5G27840 (TOPP8)
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 832846
NCBI-ProteinID: NP_001330890
TAIR: AT5G27840
UniProt: O82734
Position
5:complement(9862923..9865172)
AA seq 324 aa
MMTSMEGMVEKGVLDDIIRRLLEGKGGKQVQLSESEIRQLCFNARQIFLSQPNLLDLHAP
IRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKI
YLLRGNHEDAKINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSP
DLDNLNQIREIQRPIEIPDSGLLCDLLWSDPDQKIEGWADSDRGISCTFGADKVAEFLDK
NDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIMKP
APASSSHPLKKDFHNRTLGYNLSA
NT seq 975 nt   +upstreamnt  +downstreamnt
atgatgacgagtatggaagggatggtggagaaaggagtattggatgatattataagaaga
ttgttagaaggtaaaggaggcaaacaggttcagctttccgagagcgagattcgtcaactc
tgctttaacgctcgtcaaatcttcctctctcaacctaatctccttgatctccatgcccca
attcgcatctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttgaatac
ggaggttatcctccttcagcaaactatctattccttggtgattacgttgacagaggcaaa
caaagtcttgagaccatatgtttgcttcttgcttacaagatacggtacccatcgaagata
tatctgttgagagggaaccatgaggatgctaagatcaacaggatttacgggttttatgac
gagtgcaaacggagattcaatgtacgactctggaaggtgtttactgattgcttcaactgt
ttacctgtagctgcacttattgatgagaagatactgtgtatgcacggtggtttgtcacca
gatttggataatttgaatcagattcgagagattcaaaggcctattgagattccagacagt
ggtcttctttgtgatttactttggtcagatcctgatcagaagattgaaggttgggctgat
agtgatcgaggtatctcttgcacttttggagctgataaagtcgctgagttcttggataag
aatgatcttgacctcatttgccgaggccatcaggtagtagaagacgggtatgagtttttc
gcaaaacggagattagtcacgatattctcagctccaaactatggtggggagtttgacaac
gctggtgcgttattaagcgttgacgagtctcttgtatgttcctttgagattatgaaacca
gccccagcttcaagcagtcatcctctcaagaaggactttcacaacagaaccttaggttat
aatttgagtgcttag

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