KEGG   Arabidopsis thaliana (thale cress): AT5G46910
Entry
AT5G46910         CDS       T00041                                 
Name
(RefSeq) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: JmjC JmjN zf-C5HC2 KDM5_C-hel
Other DBs
NCBI-GeneID: 834736
NCBI-ProteinID: NP_199502
TAIR: AT5G46910
UniProt: F4KIX0 A0A178UGR7
Structure
Position
5:19046339..19051379
AA seq 787 aa
MAERRICLSKEAKDGLEFLKRKKLQKMRSDSVNETVGFSTMARSGGDALRPTSASCGMRL
RVTSSDTVSKVHGASTVRGGLMKEKVEKLETDDLKWTERLPECPVYRPTKEEFEDPLTYL
QKIFPEASKYGICKIVSPLTATVPAGAVLMKEKSNFKFTTRVQPLRLAEWDSDDKVTFFM
SGRTYTFRDYEKMANKVFARRYCSGGSLPDSFLEKEFWKEIACGKTETVEYACDVDGSAF
SSAPGDPLGSSKWNLNKVSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLY
SINYQHCGASKTWYGIPGSAALKFEKVVKECVYNDDILSTNGEDGAFDVLLGKTTIFPPK
TLLDHNVPVYKAVQKPGEFVVTFPRAYHAGFSHGFNCGEAVNFAMGDWFPFGAIASCRYA
HLNRVPLLPHEELICKEAMLLNSSSKSENLDLTPTELSGQRSIKTAFVHLIRFLHLARWS
LMKSGLCTGLVSNTYGTIVCSLCKRDCYLAFINCECYSHPVCLRHDVKKLDLPCGTTHTL
YLRDNIEDMEAAAMKFEKEDGVSDLITTDEDLYKYPSSITLPAAKEDGYTPYSTIYFDFY
TEVEMTSHDQLQSGNPVMSYEANASCISSVADDYECSDYVNRRANCSSSSDSKLSEEVAC
SSSKKTRFFPVVQDEQLVADQESDGSDSECFRVKRRSSLKFENRTVVLDTRESDHHQELK
RLKKSHHHEGRYSSSSSVSRQEEEEDELVISNRKETQQQSDVKMQKKRIENHFGGFKRLK
VKGLIKP
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcggaaaggaggatctgcttgtctaaagaggctaaggatgggttagaatttctgaaa
cgtaaaaagcttcaaaaaatgagatcagactctgtcaatgaaacagtaggcttcagcaca
atggctagaagtggtggtgatgctttgagaccaacttcagcgtcatgtggaatgagatta
cgggtaacttctagtgatacagtatctaaagtgcatggtgcatctactgtgagaggtggc
ttgatgaaggaaaaagtggagaagcttgagacagatgatctaaaatggaccgagaggctt
ccagaatgtcctgtctacagaccaacaaaggaggagtttgaggatcctctgacttatttg
cagaagattttcccagaagcttcaaaatatggtatttgcaagattgtatctcctttgaca
gcaacagttcctgctggcgctgtgttgatgaaagagaaatcaaactttaagttcactacc
agagtacaaccccttcgacttgctgagtgggattctgatgataaagttacattcttcatg
agtgggaggacctatacatttcgcgactatgagaaaatggcgaacaaggtatttgcacgc
agatattgcagtggtggctctttgcccgactcattcttggagaaagaattctggaaggaa
attgcgtgtggcaagactgaaacagttgagtatgcgtgtgatgtagatggtagcgcattt
tcatctgcaccaggtgacccactaggaagcagcaaatggaacttgaataaagtttcaagg
cttcctaagtctaccctgcgccttcttgaaacatccattccgggagtcacagaacccatg
ctttacatcggaatgcttttcagtatgtttgcctggcatgttgaggaccattatttgtac
agcattaattaccaacattgtggagcatcaaaaacttggtatgggattccaggttccgca
gctctaaaatttgaaaaggtggttaaagagtgtgtgtacaatgatgatattctatcaact
aatggagaagatggtgcctttgacgtgcttctggggaagacaactatattccccccaaag
actctgttggatcataatgtgccagtgtataaagctgtgcaaaaacctggagaatttgtt
gtcacattccccagggcttatcatgctggtttcagccacggttttaattgtggtgaggca
gtgaactttgcgatgggtgattggtttccatttggagctattgccagttgccggtatgct
catcttaaccgagtaccgttgcttcctcatgaagaattgatttgtaaagaggcaatgctc
ttgaactcaagttccaaatccgagaatctggatcttacacctacagaattgtcaggacaa
cgaagcatcaagactgcatttgtacacctgattcgttttcttcatcttgctcgatggtct
ctaatgaagtcaggattatgcacaggccttgtttcgaatacatatggaaccatagtctgc
agtttgtgtaaacgggattgctatttggcatttatcaactgcgagtgttactcacacccc
gtttgtctacgtcatgatgttaaaaagcttgaccttccatgtgggacaacgcatactctt
tacttgagagacaacattgaagacatggaagctgctgcaatgaagtttgagaaggaagat
ggagtttcagatttgattacaactgatgaagatttatataagtatccatcatcgattaca
cttccagctgcgaaagaagacggatatacaccgtattccactatatactttgatttctat
actgaggtagagatgacatctcatgaccagttgcaatcgggaaatcccgtcatgagttat
gaggcaaacgcttcatgtatctcctcagttgctgatgattatgaatgctctgattacgta
aatagacgagctaactgtagcagcagtagtgattcaaagctctcggaagaagtagcatgc
agcagtagcaaaaaaactcggttcttccctgtggttcaagatgaacaactagttgcggat
caggaaagtgatggatctgattccgagtgttttagagtcaaacgccgttcttcattgaag
tttgagaaccgaacagttgttctagacacaagagagtctgaccatcatcaggaacttaag
agactgaagaaatcgcatcatcacgaaggaagatatagtagtagcagtagtgttagtagg
caagaagaagaagaagatgagttagtaatttcaaacaggaaagaaactcagcaacaaagt
gacgtgaagatgcagaagaagaggatcgagaatcattttggtggctttaaacgtctgaaa
gtgaaagggctaataaagccgtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
3D Structure (2)   
   PDB (2)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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