KEGG   Arabidopsis thaliana (thale cress): AT5G48120
Entry
AT5G48120         CDS       T00041                                 
Symbol
MET18
Name
(RefSeq) ARM repeat superfamily protein
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT5G48120 (MET18)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     AT5G48120 (MET18)
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 834864
NCBI-ProteinID: NP_001318759
TAIR: AT5G48120
UniProt: Q0WVF8
Position
5:complement(19507397..19514895)
AA seq 1134 aa
MMVEPNQLVQHLETFVDTNRSSSQQDDSLKAIASSLENDSLSITQLVREMEMYLTTTDNL
VRARGILLLAEILDCLKAKPLNDTIVHTLVGFFSEKLADWRAMCGALVGCLALLKRKDVA
GVVTDIDVQAMAKSMIQNVQVQALALHERKLAFELLECLLQQHSEAILTMGDLLVYAMCE
AIDGEKDPQCLMIVFHLVELLAPLFPSPSGPLASDASDLFEVIGCYFPLHFTHTKDDEAN
IRREDLSRGLLLAISSTPFFEPYAIPLLLEKLSSSLPVAKVDSLKCLKDCALKYGVDRMK
KHYGALWSALKDTFYSSTGTHLSFAIESLTSPGFEMNEIHRDAVSLLQRLVKQDISFLGF
VVDDTRINTVFDTIYRYPQYKEMPDPSKLEVLVISQILSVSAKASVQSCNIIFEAIFFRL
MNTLGIVEKTSTGDVVQNGNSTVSTRLYHGGLHLCIELLAASKDLILGFEECSPTSGCAN
SGCSMVKSFSVPLIQVFTSAVCRSNDDSVVDVYLGVKGLLTMGMFRGGSSPVSRTEFENI
LVTLTSIITAKSGKTVVWELALKALVCIGSFIDRYHESDKAMSYMSIVVDNLVSLACSSH
CGLPYQMILEATSEVCSTGPKYVEKMVQGLEEAFCSSLSDFYVNGNFESIDNCSQLLKCL
TNKLLPRVAEIDGLEQLLVHFAISMWKQIEFCGVFSCDFNGREFVEAAMTTMRQVVGIAL
VDSQNSIIQKAYSVVSSCTLPAMESIPLTFVALEGLQRDLSSRDELILSLFASVIIAASP
SASIPDAKSLIHLLLVTLLKGYIPAAQALGSMVNKLGSGSGGTNTSRDCSLEEACAIIFH
ADFASGKKISSNGSAKIIVGSETTMSKICLGYCGSLDLQTRAITGLAWIGKGLLMRGNER
VNEIALVLVECLKSNNCSGHALHPSAMKHAADAFSIIMSDSEVCLNRKFHAVIRPLYKQR
CFSTIVPILESLIMNSQTSLSRTMLHVALAHVISNVPVTVILDNTKKLQPLILEGLSVLS
LDSVEKETLFSLLLVLSGTLTDTKGQQSASDNAHIIIECLIKLTSYPHLMVVRETSIQCL
VALLELPHRRIYPFRREVLQAIEKSLDDPKRKVREEAIRCRQAWASITSGSNIF
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgatggtagaaccgaatcagctcgttcaacatctcgaaacttttgttgacactaatcgt
tcctcttctcaacaggatgatagtcttaaagcaattgcttcttctttggagaatgattct
ttatctattacccaattggttagagagatggagatgtatttgacaacaaccgataacctc
gttcgagcacgaggtattctcctgcttgcggagattctcgattgtttgaaagcaaagccg
ttgaacgatacaatagttcatacgctcgttggattcttttccgaaaagctggcagattgg
agagcgatgtgcggggcgcttgttggttgtttggctctactgaagaggaaagatgtagct
ggtgtggttactgatatcgatgtacaagctatggcgaagtcaatgatacagaatgtgcaa
gtgcaagctttagcactgcatgagcgcaaactcgcttttgaacttctggagtgcctttta
caacaacattctgaagctattttgactatgggtgatctacttgtttatgctatgtgtgaa
gccatcgacggagaaaaagatcctcaatgcttaatgatagtttttcatctagtagagctt
ttggctcctttgttccccagtccttctggtccactcgcttctgatgcatctgatcttttt
gaagttattggttgctacttcccacttcattttacgcatacaaaagatgacgaagctaat
attagaagagaggatctctcaaggggactactgctggcgatctcttcgacacctttcttt
gaaccgtatgctattccgttgcttcttgaaaagctttcttcttctctaccagtcgcaaag
gttgattctttgaaatgtctgaaagattgcgctttgaaatatggagtagacagaatgaag
aagcactatggagctctttggtctgctttgaaagatacattttattcctctactgggaca
catttgtcatttgctatagaatccctcactagtccagggtttgaaatgaatgagatccac
agagatgctgttagtcttcttcagaggcttgttaagcaagatatctcgtttttaggtttt
gtagttgatgatacacgcataaacacagtctttgataccatctatagataccctcagtat
aaagaaatgcctgacccaagcaaactggaggttcttgttatcagtcagatactgtctgtt
tctgccaaagcttcggttcagtcatgcaatataatctttgaagccatatttttccgcctt
atgaatactctagggattgtagagaaaacttctactggcgatgttgttcaaaacggaaac
tctacagtctctaccagactctaccatggaggtcttcatctatgcattgaacttcttgca
gcatcaaaagatcttattctgggtttcgaggaatgttctccaacatctggatgtgcaaac
tcagggtgctctatggtgaaaagcttctcagttccattgatccaggtgttcacttctgca
gtatgccgctcgaatgatgattctgttgtggatgtatatcttggagttaagggtttgctg
actatgggtatgtttcggggcggctcttctcctgtatcgagaaccgaattcgagaatatt
ttggtgacattaacatcaatcattacagccaagagtggcaaaacagtggtgtgggaattg
gcattgaaggcactggtctgtatcggctcatttattgatcggtatcatgagagtgacaag
gctatgagctacatgagtatagttgtcgacaatttggtctcattggcctgttctagtcat
tgtggtcttccatatcagatgatattagaagcaacttcagaagtttgctccactggacca
aagtatgtggagaaaatggttcaaggattggaagaagctttttgttccagtttgtctgat
ttctatgtcaatggaaacttcgagtcaattgacaattgctctcagctcctgaagtgtttg
accaacaaattgcttccacgtgtggctgagatagatggtctcgagcaactcttggtgcat
ttcgctatcagtatgtggaaacaaattgaattttgtggagttttcagttgtgattttaat
ggtagggagtttgttgaggcagcgatgacaacgatgaggcaagttgtaggaattgctttg
gtagattcacagaacagtataatccaaaaagcttatagtgtggtatcatcttgtacgctt
ccagctatggagtctattcctttgacctttgttgcattagagggtctacagcgtgacttg
tcctctagggatgaattgatactttcactatttgcatcagttatcatagctgcgtccccc
tcagcatccattccagatgcgaaatcacttatacatctgcttttggtaacacttcttaag
ggttatatcccagcagctcaagctttgggttcaatggttaacaaattgggctcgggttct
ggtggaacaaatacctcaagggattgttccttggaagaagcatgtgctataatatttcac
gcagattttgcatcgggaaaaaagatttcttctaatggatctgctaaaattatagttgga
agtgagacaaccatgtcaaagatatgtttaggttactgtggttctctggaccttcaaacc
cgtgcaatcacaggactagcatggattgggaaaggtttactcatgcggggcaatgaaaga
gttaatgaaatagctctggtgctagtagagtgtttaaaatccaataactgttctgggcat
gcgctgcatccttctgccatgaaacatgcagcagatgcattctctataataatgtctgat
tcggaagtgtgtctgaacagaaaattccatgcagttatacgaccactctataaacagcgg
tgtttctctacgatagttcccattttggagtctttgattatgaattcccagacttcacta
tcgagaacaatgttgcatgtagctctcgctcatgttatatccaatgttccggtaacagtc
atattggacaataccaaaaagctacaaccgttgatactggaaggcttgtctgtcttaagc
ttggactctgtggagaaagaaactcttttcagtctattactggttttatctggaacgctt
actgatactaagggacaacaatctgccagtgataatgcacatataatcatcgaatgcctg
atcaagcttacatcatatccgcatctaatggttgttagagaaacatcaattcagtgtctt
gttgcgttgttggaattgccgcatagaaggatttatcctttcagaagagaggttttacaa
gcaatagaaaagtcactcgatgatccgaaacggaaagttcgagaagaagctattaggtgc
agacaggcttgggcgtcaatcacatccggaagtaacatattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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