KEGG   Arabidopsis thaliana (thale cress): AT5G59550
Entry
AT5G59550         CDS       T00041                                 
Symbol
RDUF2
Name
(RefSeq) zinc finger (C3HC4-type RING finger) family protein
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G59550 (RDUF2)
   04121 Ubiquitin system [BR:ath04121]
    AT5G59550 (RDUF2)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT5G59550 (RDUF2)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    AT5G59550 (RDUF2)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT5G59550 (RDUF2)
SSDB
Motif
Pfam: DUF1117 zinc_ribbon_9 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-RING_5 zf-RING_16 zf-C3HC4_3 zf-RING_10 zf-C4
Other DBs
NCBI-GeneID: 836074
NCBI-ProteinID: NP_568910
TAIR: AT5G59550
UniProt: Q940T5 A0A5S9YGN4
Position
5:complement(23998164..24000166)
AA seq 407 aa
MPSTPTTPTTTTPITASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSA
ATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRR
AFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAI
ESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCR
FELPSEPNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGI
GNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSSS
AAISTSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRDSSSSVLH
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgccgtcaacgccgacgacgccgactacaacaacgccgatcacggcttcgtattggtgt
tacagctgtacgcgtttcgtcagcgtttgggctgatcaaggcacaacaaccgtcggtagc
gtcgcttgccctcactgcgacggcggttttatcgaacagattaacgattcttcctccgcc
gctaccgaattaacgattccggcttctactgaagtaagatcgatcaataacaaccgtaga
tccgtgattagacgccggagatccggtcgtcgtccgtcctttaatccggtcatcgtactt
caaggaggcgccggcgagagagaagagggagaagaaggagatgcggctagagatcgacgc
gcttttgagttttattacgatgacggatccggatcgggtcttagaccgcttccggattct
gtatctgagatcttgatgggatctggattcgagcggttacttgaacagctaagccaaatc
gaagcgtcggctactggaattggtagatctggaaaccctccggcgtctaaatcggcgatt
gagtctttacctagagtcgaaatctcggattgccacataggctcggaggctaattgcgct
gtttgcacggagattttcgagacggagacggaggcgcgtgagatgccgtgtaaacacctt
ttccacgacgattgcatcgtaccgtggctatcgattcgaaactcttgtcccgtgtgcaga
ttcgagctaccttcagagcctaatcgacggagcaacaacaacgaggaggataacgccgtg
gggatgacgatttggagacttcccggtggtggattcgccgtagggaggtttaacgcagca
atgagagacggagagagagttttgccagtggtgttaacagaaatggatggtggtgggatt
ggtaatagccaggatggtcctagacggatctcatgggttaggtcacacggtacactcgaa
tcggatagtaacggtactggctcaggttccggctccggtggaagattgaggaggatggtt
cgtggaatggtgtcgttaatgaggagagtgagaccaaaccgtagctcttcttcttcatca
gctgcgatatcaacttcttctgataatctggatttgaacattgaagtagaatctagggtt
ttggataggtcaaattcagtgatgagaagatacttcagaagaaacagaagtaacagggat
tcttcgtcttcagttcttcattga

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