KEGG   Arabidopsis thaliana (thale cress): AT1G07360
Entry
AT1G07360         CDS       T00041                                 
Symbol
MAC5A
Name
(RefSeq) CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT1G07360 (MAC5A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT1G07360 (MAC5A)
Spliceosome [BR:ath03041]
 Complex B
  Other components
   Prp19-related factors
    AT1G07360 (MAC5A)
 Complex C
    AT1G07360 (MAC5A)
SSDB
Motif
Pfam: STL11_N RRM_1 Torus zf_CCCH_4 zf-CCCH_2 RRM_occluded RRM_3 zf-CCCH_3 zf-CCCH_4 zf-CCCH
Other DBs
NCBI-GeneID: 837248
NCBI-ProteinID: NP_563788
TAIR: AT1G07360
UniProt: Q9LNV5
Position
1:complement(2260317..2262923)
AA seq 481 aa
MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE
EHDRKARAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRIL
EQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVINGQRLKLTWGR
PKPDQDGANQQGGVAHSGLLPRAVISQQHNQPPPMQQYYMHPPPANQDKPYYPSMDPQRM
GAVISTQEAGGSSTENNGASSSSYMMPPHQSYPPPPYGYMPSPYQQQYPPNHHHQPSPMQ
HYAPPPAAYPYPQQPGPGSRPAPSPTAVSAISPDSAPAGSGAPSGSSQQAPDVSTATGSS
Q
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctcacagaatactgagagatcatgaagccgatggatgggaacgctccgatttccca
atcatctgcgaatcttgtctcggtgacaacccctacgtgcgaatgaccaaagcgaattat
gataaggaatgcaagatatgtacacgacctttcacggtgtttaggtggcgacctggccgg
gatgctagatacaagaaaaccgaaatttgtcagacttgctgcaagttgaaaaatgtttgt
caagtctgtcttctggatcttgagtatggtcttccagttcaagtaagagacacagcactc
aacattagtactcatgactctatccctaaaagtgatgtcaacagagagtattttgctgaa
gagcatgacaggaaggctagagctggactggattatgaatcttcattcgggaagatgcga
cccaatgatactattttaaagcttcaaagaacaacaccgtactataagaggaaccgagca
catgtttgtagtttcttcatcaggggtgagtgtacaagaggtgctgaatgtccataccgg
catgagatgcccgaaacaggagagctatcccagcaaaacataaaagaccgttattatggt
gttaatgatccagttgctatgaagttgcttggcaaagctggtgagatgggcactttggaa
tcgccagacgatgaaagcatcaaaaccctttacgtcggtggacttaactcgagaattctc
gagcaggacatacgagaccaattctacgctcatggagaaattgaatctatcagaatcttg
gccgataaagcctgtgcatttgtcacatacacaagccgtgaaggtgcagagaaggctgcg
caagagctctccaacaggctagtcatcaacggtcagaggctaaaactcacatggggaaga
cccaaacctgatcaagatggtgcaaaccaacagggcggtgtggctcatagtgggttacta
cctcgagccgttatatctcagcagcacaatcaacccccaccaatgcagcagtactatatg
cacccaccaccagctaaccaagacaaaccttattacccatcaatggacccacagagaatg
ggtgcagtcatttcaacccaagaggctggtggttcaagcactgagaacaacggagcttca
tcttcttcttacatgatgcctccacaccagtcatacccaccaccaccatatggatatatg
ccatcgccttaccagcagcagtatcctcctaaccatcatcatcaacctagtcctatgcag
cactatgccccgcctccagcagcttacccgtacccacagcaacctggtcctggatcaaga
cctgcaccgtctccaaccgcggtctctgctatatcacccgactctgcacctgctgggtct
ggagcaccttcgggatcctctcaacaagctcctgatgtttctacagctactggttcgtct
cagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system