KEGG   Arabidopsis thaliana (thale cress): AT1G21410
Entry
AT1G21410         CDS       T00041                                 
Symbol
SKP2A
Name
(RefSeq) F-box/RNI-like superfamily protein
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT1G21410 (SKP2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT1G21410 (SKP2A)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     AT1G21410 (SKP2A)
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like F-box LRR_8
Other DBs
NCBI-GeneID: 838740
NCBI-ProteinID: NP_001321134
TAIR: AT1G21410
UniProt: Q9LPL4 A0A178W530
Position
1:7496998..7499616
AA seq 360 aa
MVMGGEASMELDQCFQKMKMEGISIKEWKDIPVELLMRILSLVDDRNVIVASGVCTGWRD
AISFGLTRLRLSWCNNNMNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQ
ELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCV
KAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESV
VALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNIS
QCTALTPSAVQAVCDSFPALHTCSGRHSLVMSGCLNLTTVHCACILQAHRAHNAVPHPAH
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggtgatgggaggagaagcatccatggaactggaccagtgttttcagaagatgaagatg
gaaggaatctcgatcaaagagtggaaagatatccctgtggagcttctgatgaggatcctt
tcccttgttgatgatcgtaatgtcattgttgcttctggtgtttgcactggctggagagat
gctatctcttttggcctcactcgtctccgtctatcttggtgcaacaacaacatgaacagc
ttggttctttctcttgttcccaagtttgtaaagctgcagactttaaatctaaggcaggac
aaaccgcaactagaggacaatgcagtggaggccatagcaaatcactgccatgagttacaa
gaacttgatctcagcaaaagcttgaaaattacagaccgttcactttatgcacttgctcat
ggttgcccagacctcacaaaactcaaccttagtggctgcacttcattcagcgacactgct
attgcgtatttgaccagattctgcagaaagcttaaagttttgaatctttgcggatgtgtc
aaagctgtaactgacaatgccttggaggctattgggaataactgcaatcagatgcagtca
ctaaacttgggatggtgtgagaatatcagtgatgatggggtaatgagtttagcttatggc
tgtccagatctcaggacccttgacctctgcggctgtgttcttattacagatgagagtgtg
gtagctctagcagactggtgtgtccacttgaggtcactggggctatactattgcagaaac
ataacagacagagcaatgtactcgctagctcaaagcggggtaaagaacaaaccgggatcg
tggaaatcggttaagaaaggtaaatacgatgaagaaggactgagaagtctcaacattagc
caatgcactgcccttacaccttcagcggttcaagctgtttgcgattcatttcccgcactt
cacacatgctcaggaaggcattcgcttgtcatgagcggctgtctgaacttaacaactgtg
cactgtgcttgtatccttcaggctcatcgtgcacacaatgcggttcctcatcctgctcat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

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