KEGG   Arabidopsis thaliana (thale cress): AT1G31600
Entry
AT1G31600         CDS       T00041                                 
Symbol
TRM9
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
  KO
K10770  alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ath03016]
    AT1G31600 (TRM9)
Enzymes [BR:ath01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.229  tRNA (carboxymethyluridine34-5-O)-methyltransferase
     AT1G31600 (TRM9)
Transfer RNA biogenesis [BR:ath03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    AT1G31600 (TRM9)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 RRM_1 Toxin_14
Other DBs
NCBI-GeneID: 840048
NCBI-ProteinID: NP_001322355
TAIR: AT1G31600
UniProt: Q8RWY1
Position
1:complement(11312961..11316582)
AA seq 346 aa
MVQPRFVRPTQSSPSSISGEPNSSNLYVANCGPAVGLTHNAIAAVFAEFGEVNGVYAADD
SGVRVIVSFADPFSAKAALEALSGRPCPDLKGRSLHIRYSVLQLPSETQVNDCVPVSLID
SELNIPGLFLLPDFVTVAEEQQLLAAVDARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRL
GELPSFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSL
SLAGPCIMEFRRYSVSTWKASTTDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYI
PHHKIDKVKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYCDSQQQM
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggttcagccgcgattcgtccgtccgacgcaatcatcgccatcttccatttctggagaa
ccaaattcatcaaatctatacgtcgcgaattgtggaccggcggttggactaacacacaac
gcaatcgcggcggtgttcgctgagttcggtgaagtaaacggagtctacgcggcggatgat
agcggcgttcgtgttatcgtctctttcgctgatcccttctccgcgaaagcagctctagaa
gctttgagtggtcgaccatgtcctgaccttaaaggacgttctttgcatattcgatattca
gttcttcaattaccttccgagacgcaggtgaatgattgtgttccagtgtctttgattgat
tcagagttgaatattccagggcttttcttgttacctgattttgtcactgtggcagaagaa
cagcaattgcttgcagctgttgatgctcgacattggattggtcttgctaaacggcgtgtt
caacactatggatatgagttttgttacgggacaagaaatgttgataccaaaaagcgtctc
ggtgagcttccgtcgtttgtttctcctatacttgaaagaatctatttgttcccgaacttt
gacaacggctcagcaagcttgaatttggaccagttaacggtaaatgagtacccatctggt
gtgggattatcgcctcatattgatacacattcagcatttgaagattgcatattcagcctt
tctttagctggtccttgtattatggaattcagaagatactctgtttccacatggaaagcc
tcaactaccgatgctgagaagtcgggtgactcctcttgcatcaaaaaggccttatatctt
cctcctcggtctatgctcttattatccggtgaagcacgatatgcttggaatcactacatt
ccacatcacaagattgacaaggtgaaggataaagtgatcagaagaagttctagaagggta
tctttcacattacggaaggtgagaaatcatccttgcagttgtaagtatccacaatactgt
gactctcagcaacaaatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (3)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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