KEGG   Arabidopsis thaliana (thale cress): AT1G48900
Entry
AT1G48900         CDS       T00041                                 
Name
(RefSeq) Signal recognition particle, SRP54 subunit protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03060  Protein export
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AT1G48900
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ath02044]
    AT1G48900
Enzymes [BR:ath01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AT1G48900
Secretion system [BR:ath02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AT1G48900
  Eukaryotic Sec-SRP protein
   AT1G48900
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 AAA_22 MMR_HSR1 ResIII AAA_33 CLP1_P AAA_19 AAA_17 Fe-ADH Zeta_toxin AAA_30 ATPase ATP_bind_1 APS_kinase DO-GTPase2 MeaB CbiA AAA_24 AAA_16 AAA
Other DBs
NCBI-GeneID: 841312
NCBI-ProteinID: NP_564535
TAIR: AT1G48900
UniProt: P49967 A0A178WMZ2
Position
1:complement(18084715..18087934)
AA seq 495 aa
MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV
NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK
YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK
KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM
MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE
EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM
GSGKDMMGMFGGGDK
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggtgttggcggagctaggcgggcggattacccgcgcgatacagcagatgagcaatgtg
acaattatcgatgagaaggctttgaatgaatgcttgaacgagatcactcgtgctttgctt
caatccgatgtttcatttccccttgtgaaagagatgcagagtaatattaagaaaatcgtc
aatcttgaagatctagcagctggtcacaacaagcgccggatcattgaacaggctatcttt
agtgaactctgtaagatgttggatccagggaagcctgcgtttgctcctaaaaaagctaaa
gctagtgtagttatgtttgttggattacaaggtgctggaaagacgacaacttgtactaag
tatgcttattatcatcagaagaaaggatacaaaccagctttggtttgtgcggatactttc
agggctggtgcgttcgatcagctgaaacagaatgctaccaaggctaagatccccttttat
ggaagctacacggaatccgatcctgtgaaaattgctgttgagggagtagatacgtttaag
aaagaaaactgtgatctcattattgttgataccagtggtcgccataaacaagaagcttct
ctctttgaagaaatgcgtcaagttgctgaagcaacgaaaccagatcttgttatatttgtt
atggatagcagtattggtcaagctgcatttgatcaagctcaagcctttaagcagagtgtt
gctgttggagctgtaattattactaagatggacggccatgccaagggtggtggggctctt
agcgctgttgcagctacgaaaagtcctgtgatatttatcggaacaggagagcatatggat
gagtttgaagtgtttgacgtcaaaccatttgtcagccgtctcttaggaatgggtgattgg
tctggattcgtggataagctacaagaggtagtacctaaagatcaacagcctgaacttctg
gaaaagctctctcagggtaactttacgttgagaattatgtacgaccagttccagaacata
ctgaacatgggtccacttaaggaggttttctcaatgctgcctggaattagtgctgaaatg
atgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatgatg
gattctatgacaaatgatgaactggacagctcaaacccaaaggtgtttaacgagtcacgg
atgatgcggatagcaagagggtcagggaggcaagtaagagaagtgatggagatgttggaa
gagtacaagaggctagcgaagatatggagcaagatgaaaggactcaagatcccaaagaat
ggagatatgagtgcactctcgagaaacatgaacgcacagcacatgagcaaggtcctccca
cctcagatgctcaagcagattggcggcatgggcggtctgcagagtctaatgaagcagatg
ggttccggcaaggacatgatgggaatgttcggtggcggagacaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (3)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (24)   
   Pfam (24)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system