KEGG   Arabidopsis thaliana (thale cress): AT1G63810
Entry
AT1G63810         CDS       T00041                                 
Name
(RefSeq) nucleolar protein
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AT1G63810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT1G63810
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    AT1G63810
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap Nrap_D2 Nrap_D6
Other DBs
NCBI-GeneID: 842684
NCBI-ProteinID: NP_001320199
TAIR: AT1G63810
UniProt: Q0WVM5
Position
1:complement(23669458..23675949)
AA seq 1053 aa
MEADTKTDSRTLKVNDLLKDARLDYDSLRKLVDDTVSSIKEAIDGIPEKFQVTSELAPSF
VEDIGADKEVEFSFKKPNGFNLCGSYSICGMAKPDTSVDLLVHLPKECFYEKDYMNHRYH
AKRCLYLCVIEKHLLSSSSIEKVVWSTLHNEARKPVLVVFPAKKLDQFPGFSIRLIPSAT
SLFSVAKLSISRNNVRSVTADGVPEPTPTYNSSILEDMFLEENSEFLKKTFSEWKELSDA
LILLKIWARQRSSIYVHDCLNGFLISVILSYLATHSKINKALSALDIFRVTLDFIATSKL
WERGLYLPPQSEIRVSKEEKMQFRELFPVVICDSSTFVNLAFRMTSVGFLELQDEASLTL
KCMEKLRDGGFEEIFMTKIDYPVKYDHCIRLQLKGKTAVSLSGFCLDKECWRLYEQKVHS
LLLEGLGDRAKSIRVVWRNTNQDWHVESGLSVLDREPLFIGISVSSTEKAYRTVDIGPDA
ENKIEALRFRKFWGEKSDLRRFKDGRISESTVWETQQWTKHLIMKQIVEYILKRHLSLTS
DDIVQLVDQLDFSLNYGGKDPISLSGNLVQAYEVLSKCLREIEGIPLKVSSVQSLDSALR
FTSVFPPEPHPVACEKIDSRRLQKLIPSCIPAMEVMIQLEGSGNWPMDDLAVEKTKSAFL
LKIAESLQNVKGIPCTATEDNVDVFIGGYAFRLRILHERGLSLVKREIGVDPVKHVSSTD
KMLFIRSQHASMINGLQGRFPVYAPVARLAKRWVSAHLFSGCLAEEAIELLVAYLFLTPL
PLGVPSSRINGFLRFLRLLADYEWMFYPLIVDINNDFGRNDEKEINDNFMSSRKGYEEDK
QNISSAMFLAAPYDKASEAWTSTSPNLLEQKRLVAYARSSANVLSKMVLQEHNDSVQWEC
LFRTPLNNYDAVILLHRDKLPYPRRLLFPSELNQGKHVARGKASRLFNPFMSPGDLKRSH
EELKNKLMVDFEPTKCLLSGLQEEFGTLKPWYDHIGGDAIGLTWNKHNSKKRERDEEEEE
EEESNPMEMLKAVGEMGKGLVRDIYLLKPPRFV
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggaggcagatactaagacagactctcgtactctgaaagttaacgacttgttaaaagat
gctcgcttagattacgattctctcaggaagcttgttgatgataccgtttcgtcgattaaa
gaagctattgatggaatccctgaaaaatttcaggttacctcggagttagctcctagtttt
gttgaggacattggggcagataaagaagtggagttcagttttaagaagccaaatggtttc
aatctctgtggaagttactccatttgtggcatggcaaagccggatacttctgttgatctt
cttgttcacttgcctaaagaatgtttttatgagaaggattacatgaatcatagataccat
gccaaaagatgtctatatctttgtgttattgaaaagcatttgttgtcgtcatcgtccatt
gagaaggttgtatggtcaaccttacataacgaagctaggaagccagtccttgttgttttc
ccagctaagaaacttgatcagtttcctggattttccataaggttaatcccttccgcaaca
tcactgtttagtgttgcaaaattgagtattagcagaaacaacgtccgttctgtaactgca
gatggtgtccctgagcccacgccaacttacaactcaagcatattggaggacatgtttctg
gaggaaaattctgagtttctcaagaaaaccttctctgagtggaaggagttgagcgatgct
ttgattttgctgaagatatgggcaagacaaaggagctcgatatacgtccacgattgcttg
aacggatttctaatctctgtgatactttcatatcttgcaacccattccaaaattaacaag
gcactaagtgcattagatatattcagagtgacattggatttcatagccacttctaaatta
tgggagagaggtttgtatcttccgccacagagtgaaattcgtgtctcgaaggaggagaag
atgcagttcagagagttgttccctgttgttatatgcgattcatctacgtttgtgaacttg
gctttccggatgaccagtgttggattcctggagcttcaagatgaggcttctttgacgctt
aagtgtatggagaaactcagagatgggggattcgaggagatttttatgactaagattgac
tatcctgttaagtatgaccactgcataaggttacagctaaaggggaaaacagcagtgtct
ctgtcagggttttgtttggacaaggaatgttggagactctatgagcagaaagtgcatagc
ctgcttttagaaggactcggtgacagagctaaatcaatccgtgtagtttggagaaatacc
aatcaagattggcatgtagagagtggcttgtcagttcttgacagagaacctcttttcatt
ggcatatctgtcagctccactgaaaaggcttatagaacagttgatattgggccagatgct
gaaaacaagatagaggcacttagattccggaagttttggggtgagaagtctgatctaagg
aggtttaaagatggaagaatatctgaaagcacagtttgggagactcagcagtggaccaaa
catcttatcatgaaacaaattgttgaatatatccttaagcggcatctttcactgacgtcc
gatgacattgtacaattagtggatcaacttgatttctctctaaactatgggggcaaagac
ccaatatctttatctggaaatttggttcaagcctatgaagttttatcaaagtgcttgcgt
gagattgaaggcatacctctcaaagtctctagcgttcagtctttagattcagctctcagg
ttcacatccgtattccctcctgaacctcacccagtggcttgcgaaaaaatcgattcgcga
agactgcaaaaacttataccatcctgcattccagcaatggaagtcatgattcagctagaa
ggttctggtaactggcccatggatgatttagcagttgagaaaacaaaatctgccttcctc
ctgaaaattgcagagagccttcagaacgtcaagggaataccatgcacagctactgaggat
aatgtcgatgttttcattggtggttacgcatttcgcttgagaatattgcatgaaagaggc
ctgagtttggtgaagagagaaattggagtggacccggtgaagcatgtttcctctaccgat
aaaatgctttttattcgtagtcaacatgcaagtatgattaatggtttgcaaggtcgattt
cctgtatacgcaccagttgccaggcttgcaaaaagatgggtttctgcgcatctcttttct
ggttgcctggcagaagaggccattgaacttttggttgcttatctcttcctcacacctctc
ccactcggtgttccttcctcccggattaatggattcttaaggttcttgcgattactagca
gactatgaatggatgttctacccgttgattgttgacataaacaatgactttggtagaaat
gacgagaaagagatcaatgataacttcatgtcaagtagaaaaggctacgaagaggacaaa
caaaacataagttcagctatgttcttggctgctccttacgacaaggcatcagaggcatgg
acatcaacttcaccaaatttattggaacaaaaaaggttggtggcttatgctcgaagcagt
gcaaacgtgttgagcaagatggtattgcaagaacataatgattctgttcaatgggagtgc
cttttcaggacacccttgaacaactatgacgcagttattcttctccatagagacaaatta
ccttatccacgtcgtcttctgtttccatctgaacttaaccaagggaagcatgtagcacgg
ggaaaagcgagtagattgttcaacccatttatgtcgcctggagatttgaagagaagccat
gaagagcttaagaataagctaatggtggacttcgagccgaccaagtgcttgttgagtggg
ttgcaggaagagtttgggacgttgaagccatggtatgatcatataggaggcgacgcaatt
ggtttaacatggaacaaacacaattcaaagaaacgagaacgagatgaagaagaagaagaa
gaagaagaaagtaatccaatggagatgttaaaggcggtaggcgaaatgggtaaagggtta
gtgagggatatctatttgctcaagcctccacgctttgtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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