KEGG   Arabidopsis thaliana (thale cress): AT1G72730
Entry
AT1G72730         CDS       T00041                                 
Name
(RefSeq) DEA(D/H)-box RNA helicase family protein
  KO
K03257  translation initiation factor 4A
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G72730
   03012 Translation factors [BR:ath03012]
    AT1G72730
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT1G72730
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     AT1G72730
   mRNA cycle factors
    Stress granule specific factors
     AT1G72730
Translation factors [BR:ath03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    AT1G72730
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT1G72730
  Exosomal proteins of bladder cancer cells
   AT1G72730
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 AAA_19
Other DBs
NCBI-GeneID: 843605
NCBI-ProteinID: NP_177417
TAIR: AT1G72730
UniProt: Q9CAI7 A0A178WL55
Position
1:complement(27377759..27380182)
AA seq 414 aa
MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG
FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE
LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR
ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ
PENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcaggaatggcatctgatggaactcaatatgatcctcgtcagtttgatactaagatg
aatgccattctcggcgaggaaggagaggaaacattctacactaactatgacgaagtttgc
gacagctttgatgcaatggaattgcaaccagatcttctcaggggtatttatgcttacggt
ttcgagaagccttctgctattcagcaaagaggaattattccattctgcaagggtcttgat
gtgatccagcaagctcaatctggaactggaaagaccgctaccttttgctctggtgtttta
cagcagctcgatattagtttggttcaatgccaagctcttgttttggcacctacccgagaa
cttgcccagcaaattgaaaaggttatgagggcacttggtgactaccttggcgtcaaggct
caggcttgtgttggtggaacaagtgttcgtgaggatcaacgtgttcttcagtctggtgtt
catgttgttgttggaacccctggtcgtgtctttgacttgttacgcagacaatccctccgt
gctgatgcaatcaaaatgtttgttcttgatgaagctgatgaaatgctctctcgtggtttc
aaggatcagatatacgacatcttccagcttcttccttccaaggttcaggttggtgttttc
tctgctacaatgcctcccgaagcccttgagatcacaaggaagttcatgaacaaaccagtc
aggattctggtcaagcgagacgagctgactcttgaaggtatcaagcagttttatgtcaat
gtagacaaggaagagtggaaactcgagacactatgcgatctctacgagacactggccatc
actcaaagcgtcatctttgtgaacacaaggcgtaaggttgattggctaaccgacaaaatg
agaagccgtgaccacactgtttcagctacacacggagacatggaccagaacacaagagac
atcatcatgcgcgaattccgctctgggtcttcccgtgtcctcataaccactgacctcctt
gctcgtggtatcgatgttcagcaagtctctctggtcataaactttgacctcccaacccaa
ccggagaattaccttcatcgtattggaagaagtggaaggtttgggagaaagggagtagca
atcaatttcatgacatcggaggatgagagaatgatggctgatattcagaggttttacaat
gtggtcgttgaggagttgccaagcaatgttgctgatcttctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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