KEGG   Arabidopsis thaliana (thale cress): AT1G79890
Entry
AT1G79890         CDS       T00041                                 
Name
(RefSeq) RAD3-like DNA-binding helicase protein
  KO
K11273  chromosome transmission fidelity protein 1 [EC:3.6.4.13]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G79890
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    AT1G79890
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD ResIII AAA_11 HEXIM
Other DBs
NCBI-GeneID: 844328
NCBI-ProteinID: NP_001321115
TAIR: AT1G79890
UniProt: A0A1P8APW6
Position
1:30048519..30052203
AA seq 855 aa
MTEIREFPAFPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQWLTDR
KEKRNSGLTEESHKVDGNDDEDEPDWMRNFTLNEADGANGDKSIKNTKSPFSLRKHAKEV
FTEGEKADELNDQEFLLDEYESQDESSPGGGNSKRKPARGFDSSSSEDEEDENDCSDDEQ
GGFKVFFCSRTHSQLSQFVKELRKTVFAKKLKVVCLGSRKNLCINEDVLKLGNVTRINER
CLDLQKKKISQVSKKKNLGANVRIVRTKASCRCPMLRKHKLQREFKAESFQQEAMDIEDL
VQLGREMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSLKNSVVIIDEAHNLAD
TLLSMHDAKLTVSQLEDIHCSIESYLGRFQNLLGAGNRRYIQIMLILTRAFLKPLASDRN
LSSVNVGLDTENPSKSKPCGACSMAIYDFLFSLNIDNINLVKLLAYIKESNIIHKVSGYG
ERVAAMLQKDPVAHEEMSKLTSFRAFSDMLVALTNNNGDGRIIISRTSSSTSGQHGGYIK
YVMLTGAKLFSEVVDEAHAVILAGGTLQPIEETRERLFPWLPSNQLQFFSCSHIVPPESI
MPIAVSHGPSGQSFDFSHSSRSSIGMIQELGLLMSNLVAVVPEGIIVFFSSFEYETQVHT
AWSNSGILRRIVKKKRVFREPRKNTEVEAVLRDYKEAIESERGAIMLAVVGGKVSEGINF
SDSMCRCVVMVGLPYPSPSDIELLERIKHIEGRADSDSIKPSVTLVDDSYYSGDVQAGFG
VLKSCKRRGKEYYENLCMKAVNQSIGEFVVSTICDDISGGCVLLIDNGTETECSSRLVFQ
VGQSDTKRTMHPFYW
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgacggagatacgagagttcccggcgtttccatacaagccgtactcgatccagatcgat
ttcatgaatgcgctctatcaatttctcgataagggaggcgtctccatgctcgaaagcccc
actgggactggaaaatctctaagcattatctgcagtgctctccagtggcttactgaccgc
aaggagaaacgaaactcaggattgaccgaagaatcccataaggttgatggaaacgatgat
gaggacgagcccgattggatgaggaattttactctcaacgaagcagatggagccaatggt
gacaagagcatcaaaaacaccaaatccccattttctctcaggaagcatgctaaggaagtt
ttcacggaaggggaaaaggctgatgagctaaacgatcaagaatttttgttggatgaatac
gaaagccaagatgaatcatctccgggcggaggcaactctaaaagaaaacctgcccgaggt
tttgacagtagttcatcagaggatgaggaagatgagaatgactgctcggatgacgaacaa
ggaggcttcaaggttttcttttgcagccgcacacattcacagctttcccagtttgtcaag
gagttgagaaagactgtctttgccaaaaaactcaaagttgtgtgtctcggctcccgaaag
aacttgtgcataaacgaagatgttcttaagcttgggaatgtgacccgaatcaacgagagg
tgcttggacttgcaaaagaagaagatatctcaagtctctaaaaagaagaatttaggtgca
aatgtaagaatagtacgaaccaaagcttcttgcagatgcccaatgcttagaaaacataaa
ctacagagagaattcaaggctgagagttttcaacaagaagccatggacattgaggatctt
gttcagcttggacgagagatgagaacttgtccatactacggttctagaagaatggccccg
gcagctgatcttgttattcttccatatcaatctcttctatcaaagtcgtcacgagaatct
cttggcctaagcttgaaaaatagtgttgttatcatagacgaggctcacaatttggctgac
actcttctcagtatgcacgatgcaaaactaacagtgtcacagttggaggatatacattgc
agcatagagagttatctgggaagattccagaatctcttgggagctggaaacaggagatat
atccaaattatgttgattcttacccgagctttcctcaaacctcttgctagtgataggaat
ctgagtagcgtaaatgttggtcttgatactgaaaacccctctaaaagcaagccttgtggt
gcttgttcaatggcaatatatgactttttgttttctctcaatatagacaatataaatttg
gtcaagttactcgcctatataaaggaaagcaatatcattcataaggtcagtggatatgga
gagagagtcgctgctatgttgcagaaagatccagtggctcatgaagaaatgagcaagtta
acaagttttagagcgttttctgatatgttggtggcgctcactaataacaatggtgatggg
cggataataatctcaaggacgagttcgtctacctctggccaacatggagggtacattaaa
tatgtcatgctcactggagcgaagttattttcagaggtggtggatgaagcgcatgctgtc
atattggccggtgggactcttcaacctatagaagagacaagggaacgactctttccatgg
ctaccatcaaatcagctgcagttcttctcatgtagtcacattgttcctcctgagagcata
atgccaattgcagtttcacatggtccttctggtcagtcttttgactttagccacagttca
agaagctcaataggaatgatacaggagttaggactcttaatgagcaaccttgtggcagtg
gttcctgaaggaattatcgtcttcttctcctcctttgagtatgaaacacaggtgcacaca
gcgtggagtaactcagggatactcagaagaatagtgaagaagaagcgtgtgttcagagaa
cccaggaaaaacactgaagtagaagctgttctcagagattacaaggaagcgatagaaagc
gaaagaggggcaataatgctagctgtggttggtgggaaggtgtcagaaggaatcaacttc
agcgacagcatgtgtcggtgtgttgtgatggttggtttgccgtatcccagcccgtctgac
atagagttgttagagagaataaagcatatagaaggtcgtgcagattcagattccataaaa
ccttctgtgactttggttgatgattcttactacagtggagatgttcaagcaggatttggc
gtgttaaagagctgcaaacggagagggaaagaatactatgaaaatctgtgtatgaaagca
gttaaccaatcaatcggtgagtttgtggtttcaactatatgtgacgatataagtggaggt
tgtgttttattaattgataatgggactgaaacagaatgttcttcccggcttgtttttcag
gtagggcaatcagacacgaaaaggactatgcatccattttactggtag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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