KEGG   Arabidopsis thaliana (thale cress): AT1G80670
Entry
AT1G80670         CDS       T00041                                 
Symbol
RAE1
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
  KO
K14298  mRNA export factor
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AT1G80670 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G80670 (RAE1)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G80670 (RAE1)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     AT1G80670 (RAE1)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    AT1G80670 (RAE1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Nup160 GH18_BT1044-like
Other DBs
NCBI-GeneID: 844406
NCBI-ProteinID: NP_178182
TAIR: AT1G80670
UniProt: Q38942 A0A178WNI0
Position
1:complement(30320525..30323902)
AA seq 349 aa
MATFGAPATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGAS
LASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAM
AWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVF
NLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCH
RDGNDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDG
SIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcaacttttggtgcgcctgctaccgccaacagtaaccctaacaaatcctacgaggtt
actccatcaccggcagattctatttcgagcttaagttttagtccaagagctgatatactt
gtggccacttcatgggacaatcaggtgaggtgttgggaaatatcccgtagtggagcctct
ctagccagtgctcctaaagcatcaatatcacatgatcagccggttttatgttctgcttgg
aaagatgatggaaccacagtctttagcggtggatgtgataagcaagcaaaaatgtggccc
ttgttgtctggtggtcaacctgtaactgttgctatgcatgagggtcctatcgcagctatg
gcttggatcccgggaatgaatctccttgcaactggaagttgggataaaactttgaaatat
tgggacacaagacagcaaaatcctgtacatacccaacagcttccagacaaatgttataca
ttgtctgtgaaacatcctctgatggttgtcgggactgccgatagaaatctgatagtcttc
aacttgcaaaatcctcagactgagtttaagagaatccaatccccactgaagtaccagacg
aggtgtgttactgccttccctgatcagcaaggttttttggttggttcaattgaggggcgg
gttggtgttcatcatctggatgattctcaacagagcaaaaacttcacattcaaatgccac
agagatggaaatgatatatattctgtcaactctctgaatttccacccggtacatggcact
tttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaaacaaaga
ctcaaggccatgtcgaggtgcaatcagccaattccatgcagctcgttcaaccacgatgga
tcgatatatgcatatgcggcttgctatgactggagcaaaggtgcagaaaatcacaacccg
gcgactgcaaaaagcagcattttcttgcacctgccacaggaaagcgaggttaaggccaag
ccaagagttggagcaaccggcagaaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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