KEGG   Arabidopsis thaliana (thale cress): AT2G18510
Entry
AT2G18510         CDS       T00041                                 
Symbol
emb2444
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
  KO
K12831  splicing factor 3B subunit 4
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT2G18510 (emb2444)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT2G18510 (emb2444)
Spliceosome [BR:ath03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    AT2G18510 (emb2444)
 Complex B
    AT2G18510 (emb2444)
 Complex C
   U2 SnRNP specific factors
    AT2G18510 (emb2444)
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 OB_RNB
Other DBs
NCBI-GeneID: 816366
NCBI-ProteinID: NP_179441
TAIR: AT2G18510
UniProt: Q9ZU66 A0A178VZK5
Position
2:complement(8030960..8033619)
AA seq 363 aa
MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR
VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS
NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPSSAPQVNGLPRP
FANGSMQPVPIPAPRQPPPPPPQVYQTQPPSWPSQPQQHSMVPPPMQFRPPQGMPPPPPP
QFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPQQQQPPYQHHHMSMPPPPP
HQG
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgacgactcgaatcgctcctggtgttggagctaatcttctcggccaacactccgctgag
aggaaccaagacgccactgtttacgtcggtggtctcgatgctcagctttctgaagaattg
ctttgggaattgttcgttcaagctggacctgttgttaatgtctatgtaccgaaagataga
gtgacaaatcttcatcagaactatggattcattgaatatcgtagtgaggaagatgctgat
tatgcgattaaggttcttaacatgattaagctccacgggaagcctatacgtgttaacaag
gcatctcaagataagaagagcctggatgttggtgctaaccttttcattggaaaccttgac
cctgatgtggatgagaagctcttgtatgatactttcagtgcatttggtgtgattgcttct
aatcctaagataatgagagatcccgatactggaaactcacgaggttttggtttcatcagc
tatgactcctttgaagcatctgatgctgctattgagtcaatgactggacaatatctcagt
aatcgtcaaatcacagtctcttacgcatacaagaaagacaccaaaggagagcgccatggt
actccagcagagaggcttttggcagccacaaatccaactgcccagaaaagcagaccccat
acgctattcgcaatgggccctccatccagtgctcctcaagttaatggtctaccacgtccg
tttgctaacggcagcatgcaacctgtcccgattcccgctccccgtcaaccaccaccacct
cctccacaagtatatcaaactcagccaccatcctggccatctcagccacaacaacacagc
atggtcccaccacccatgcaattccgtccacctcagggtatgcctccgccaccacctcct
cagtttctaaatcaccaacaaggtttcggtggtccgaggccgccgccaccacctcaagcc
atgggaatgcaccaacatggaggatggccaccgcaacacatgcagcagcaaggtggacca
ccacaacaacaacaaccaccataccaacaccatcacatgtctatgcctccaccaccacca
caccaaggttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

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