KEGG   Arabidopsis thaliana (thale cress): AT2G33730
Entry
AT2G33730         CDS       T00041                                 
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT2G33730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT2G33730
Spliceosome [BR:ath03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    AT2G33730
 Complex C
   U5 SnRNP specific factors
    AT2G33730
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 817938
NCBI-ProteinID: NP_180929
TAIR: AT2G33730
UniProt: P93008 A0A178VYN8
Position
2:complement(14265281..14268003)
AA seq 733 aa
MKRTINEVVGSTSVNTLDSSIAKKPVFLTKKQREELALKRRQDQISEQRVRREQLGRPEP
ETEDVSNGDTNRDKDRDRDRDRDRERDRDRERDRGRDRDRDRDRDRDRDRERERDRERDR
RERDREPDRRNREKEREEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVIRP
SEKFRFSFDWENTEDTSRDMNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAAKHEKEMRD
EIRKKDGIVEKPEEAAAQRVREEAADTYDSFDMRVDRHWSDKRLEEMTERDWRIFREDFN
ISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETG
SGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRV
TSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF
EPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVT
IGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAG
YRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMY
THRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELARHEASRFKPGTVP
DRPPRHSDTVYIN
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgaagcgaacaatcaacgaagtcgtcggatctacctccgtcaatactctcgattcctcc
attgctaagaagcctgtcttcctcaccaaaaaacagcgggaagagttagccctaaaacgc
cgccaggatcaaatctccgagcaacgtgtccgtcgtgagcaacttggtcgccccgagccc
gagacggaagatgtctccaatggagataccaatcgggataaggatcgagatagagatcgg
gaccgagaccgagaacgtgaccgagatagggagagagatagagggcgagatcgagaccgc
gatagggatagagacagggatagggatagagagcgagagagagaccgtgagcgtgaccgt
cgtgaacgagatcgtgaaccggatcggagaaatagagaaaaggagagggaagaggaggtt
aaggctagggagaaggcgcgtgttgagaaattagttgagagagagaaggagaaggaactt
gacgccattaaagagcagtatcttggaggtaagaagccgaagaagagagtcattaggcca
agcgagaagtttcgtttctcttttgattgggaaaacactgaggatacttctagggatatg
aacgttctttaccaaaaccctcatgaagctcagcttctctttgggagagggtttcgtgct
ggtatggaccgtcgtgagcagaagaaacaagcggctaagcatgagaaagagatgcgagac
gagattcgtaagaaagatggtattgtagagaaaccagaggaagctgctgctcagagagtg
agagaagaagctgctgatacttatgactcgtttgatatgagggttgacaggcattggagt
gataagagattagaggagatgactgaaagggattggcgtattttcagagaagatttcaat
atctcttacaagggttcgaggattcctcgtccgatgaggagctgggaagagagtaagctt
acttctgagcttttgaaagctgtggagagagctggatacaagaaaccttctcctattcaa
atggcagctataccacttggactgcaacagcgtgatgttatcggcattgcagagactggt
tctggtaagactgctgcttttgttttacccatgttagcttacatctctagattgccaccg
atgagcgaagagaatgagactgaggggccttatgctgttgttatggcccctactagagag
cttgctcagcagattgaggaggaaactgttaagtttgcgcattatctagggtttagggtg
acttctattgtgggtggtcagtcgattgaggaacaggggttgaagataacacaagggtgt
gagattgtgattgctactccgggtcgtctgattgattgccttgagaggcgttatgcggtg
ttgaaccagtgtaactatgtggttcttgatgaggcagatcggatgattgacatgggtttc
gagccacaggttgcaggtgtgttagatgcgatgccttcaagtaatttgaaacctgagaac
gaagaagaagagcttgatgaaaagaagatttatagaactacatatatgtttagtgctaca
atgcctcctggggtagagcggctagctcggaagtacttgaggaacccggttgttgtcacc
attggtactgctggaaagactacggatttgatttcgcaacatgttattatgatgaaagaa
tcagagaaattcttcagattgcagaaactgctcgatgagctcggcgagaagactgccatt
gtgtttgttaacacaaagaaaaattgtgactcgattgctaagaatctggataaggcaggg
taccgtgtcacgaccttgcacggtgggaaatcacaagagcagagagaaatcagcttagaa
ggattcagagcaaagagatacaacgttcttgttgcaacagatgttgtaggacgtggaatt
gatattccggatgtggctcatgtcataaactacgacatgcctaaacatatagagatgtac
acacatcgtatcggacgtacaggacgtgctgggaaaagtggtgttgcgacttcgttcttg
acacttcatgataccgaagtcttctatgatctgaagcagatgcttgttcagagcaacagt
gcggtgcctcctgagctggcgagacatgaagcgtccagattcaaaccaggtacggttcct
gatagacccccaagacatagtgacactgtctatataaattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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