KEGG   Arabidopsis thaliana (thale cress): AT2G45500
Entry
AT2G45500         CDS       T00041                                 
Name
(RefSeq) AAA-type ATPase family protein
  KO
K13254  spastin [EC:5.6.1.1]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT2G45500
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ath04812]
    AT2G45500
Enzymes [BR:ath01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     AT2G45500
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    AT2G45500
Cytoskeleton proteins [BR:ath04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     AT2G45500
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N Vps4_C AAA_5 AAA_22 AAA_16 AAA_14 TIP49 Mg_chelatase AAA_2 TniB RNA_helicase nSTAND3 DUF815 IstB_IS21 AAA_25 Guanylate_kin AAA_33 DUF4368 AAA_24 NACHT AAA_7
Other DBs
NCBI-GeneID: 819158
NCBI-ProteinID: NP_001078063
TAIR: AT2G45500
UniProt: Q0WMJ4
Position
2:complement(18749352..18752866)
AA seq 487 aa
MSFLRGIIDSFSSILNEESKKDPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLAK
EEIAKGVRAEEWGLHDDALLHYRNAQRIMNEATSTPSPSYISSSEKEKVRSYREKISNWQ
NQVSERLQALGVGMSENKRTVAYPSSASVSSTASRYRKTLSQKTPVARGGVATPRNPKDA
AASPKPVKESGNVYDDKLVEMINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRD
LFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTL
FQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGAT
NKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKETEGYSG
SDLQALCEEAAMMPIRELGANILTIQANKVRSLRYDDFRKSMAVIRPSLSKSKWEELERW
NSEFGSN
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgagtttcctcagaggtataattgattcgtttagctctattctcaacgaagaatctaag
aaagatcctagtgtttcatcatcatcaacttcttctgagtccatgaatggtatcgatgga
gttccggttactaacgaacgaattgcgtataagcttaaaggatacttcgatttagcgaaa
gaggaaatcgctaaaggggttagagcagaagagtggggtttacatgatgatgctcttctt
cattatagaaatgctcaaaggatcatgaatgaagctacttctactccttctccttcgtat
attagttccagtgaaaaggagaaggtgagatcgtaccgagagaagatttcaaattggcaa
aatcaagtatctgagagattgcaagctttgggtgttggaatgtctgagaataagaggacg
gtggcatatccttcttcagcttcagtttcctctacagcgtcaaggtataggaaaacttta
tcgcaaaagactccggttgccagaggtggcgttgcaacgccaaggaaccctaaagatgct
gctgcaagcccaaaacctgtgaaagaatctggaaatgtctatgatgataagttggttgag
atgataaatacaacaatagtggatagaagcccatctgtgaaatgggatgatgtcgctgga
cttaatggagctaaacaagctttgttggagatggtaattttaccggcaaaacgaagagat
ttgttcactggtctccgaagaccagcgagaggtctgcttctctttgggccacctggcaat
gggaaaacaatgcttgccaaggcagtcgcttctgagtcacaggcaacatttttcaatgtc
tcagcatcttctttgacatcaaaatgggtgggtgaggctgaaaagctagttaaaacgctg
tttcaagttgcaatatccagacaaccgtctgttatatttatggatgaaatagatagtata
atgtcaacaaggtcaaccagtgagaatgaagcaagcagaaggctgaaatcagaatttctt
atccagtttgatggtgtgacttctaatcctgatgatttggtgattatcattggagctact
aacaagccacaggagttggatgatgcagtgcttaggagattggtgaagagaatatatgta
ccattgccggattccaacgtcagaaaactactttttaaaactaaattaaagtgccagcct
cactcgttatccgatggcgacattgataaaatcgtcaaagaaaccgaaggatactcagga
agcgatctccaagcattgtgtgaagaagctgcaatgatgccaatcagagaactcggtgca
aatattctaacgatccaagcaaataaagtaagatctctacgatatgatgattttcggaaa
tcaatggcagtgatcagaccaagcttgagtaaaagcaaatgggaagagcttgaacgttgg
aactcagagtttggctctaattga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (23)   
   Pfam (23)   
All databases (61)   

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