KEGG   Arabidopsis thaliana (thale cress): AT3G01890
Entry
AT3G01890         CDS       T00041                                 
Name
(RefSeq) SWIB/MDM2 domain superfamily protein
  KO
K11650  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AT3G01890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT3G01890
   03036 Chromosome and associated proteins [BR:ath03036]
    AT3G01890
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     AT3G01890
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    AT3G01890
   PBAF complex
    AT3G01890
   GBAF(ncBAF) complex
    AT3G01890
SSDB
Motif
Pfam: SWIB
Other DBs
NCBI-GeneID: 820093
NCBI-ProteinID: NP_566154
TAIR: AT3G01890
UniProt: Q147F4
Position
3:310007..312073
AA seq 458 aa
MSGNNELNALKGPQSSLPWPFGMASASFAPSHMAPPNFQPQFQLSQDQGISAPGRRFPHK
PPIGGPPAVPPSMELTPASRKKKHKLPDKSSLQERVAAVLPESALYTQLLEFESRVDAAL
FRKKVDIQDSLKNPPSIQKTLRIYVFNTFSNQIPGPDPPTWTLRIFGRVLDPDHTGGLVQ
NSNPLYPKFSSFFKTLKISLDQSLYPENHLIEWKRDRSPAPLEGFEIKRIGCQEFAATIL
LEMNYVPEKFKTSPALMQVLGIEVDTRPRIIAAIWHYVKVRKLQNPNDPSFFNCDAALHS
VFGEEKMKFTMLSHKISQHLSPPPPIQLVHKIKLSGNNPAISACYDVLVDIPAPVQTELS
NLLANPEKNKEIEACDEAICGAIRKIHEHRRRRAFFLGFSQSPVEFTNALMESQTKDLKL
VAGEASRNAEKEGRSEFFNQPWVEDAAIRYLNRKPAGG
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtctgggaataacgagttgaacgcactaaaagggcctcaaagctctctgccttggcca
tttggaatggcctctgcatcgtttgctccctcccacatggcccctcctaactttcaacct
cagtttcagctctctcaagaccaagggattagtgctcctggaagaaggttcccacataaa
cctcccattggaggacctcctgctgttcctcctagtatggagttgactccagcttccagg
aaaaagaaacataagcttccagacaagtcctccttgcaggagcgcgttgctgccgtcttg
cccgagtctgctctctacacacagcttcttgagtttgagtctcgggttgatgccgctctc
ttcagaaagaaagttgacatccaagactcccttaagaaccctccttccattcagaagacc
cttaggatctacgttttcaacaccttttccaaccagatccctggtcctgaccctcccaca
tggactcttaggattttcggcagggtcctggatcctgaccacactggtggattagttcag
aattcaaacccactttatcccaagttctcgtctttcttcaaaacgttaaagatatccctg
gaccagagcctgtatcctgagaaccatctgatcgaatggaaaagggatcgatcgcctgct
cctctggaagggtttgagataaagaggatagggtgtcaggagtttgcagctactatactg
ttggagatgaattacgtccctgagaagttcaagacttctcctgctttgatgcaagttttg
ggcattgaggttgacactcgcccaagaatcattgcggcaatctggcattacgtgaaagtc
aggaaactgcaaaacccaaacgacccttctttcttcaactgtgatgctgctctccacagt
gtttttggggaagagaagatgaaattcactatgctctctcataagatatctcagcaccta
tcacctccgcctcccattcagcttgtacacaagatcaagctttcggggaacaatccagcc
atctcagcatgttacgatgtgcttgtggacataccagcaccggtccaaacggagctttcc
aatctgctcgctaatccagagaagaacaaagagattgaggcatgtgatgaagccatatgc
ggagccataaggaaaatccacgagcacagaaggagacgggcgtttttcttagggtttagc
cagtcaccggtggaattcaccaatgccttgatggaatctcagaccaaagatctgaagctt
gttgcaggagaagcaagtcgaaacgctgagaaagaaggccgatcagagttcttcaatcag
ccatgggtggaggatgctgcaatacgttacttgaaccggaagccagcaggcgggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system