KEGG   Arabidopsis thaliana (thale cress): AT3G53500
Entry
AT3G53500         CDS       T00041                                 
Symbol
RS2Z32
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT3G53500 (RS2Z32)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT3G53500 (RS2Z32)
Spliceosome [BR:ath03041]
 Common components
  Common spliceosomal components
   SR proteins
    AT3G53500 (RS2Z32)
SSDB
Motif
Pfam: RRM_1 zf-CCHC zf-CCHC_5 RRM_5 zf-CCHC_2 CLIP1_ZNF RRM_occluded zf-CCHC_3
Other DBs
NCBI-GeneID: 824518
NCBI-ProteinID: NP_190918
TAIR: AT3G53500
UniProt: Q9FYB7 A0A178V7M8
Position
3:complement(19834240..19837088)
AA seq 284 aa
MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
RYYLDGRDFDGSRITVEASRGAPRGSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAGDWK
NKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGRSYS
RSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVIDASPKRGSDYDGSPKENG
NGRNSASPIVGGGESPVGLNGQDRSPIDDEAELSRPSPKGSESP
NT seq 855 nt   +upstreamnt  +downstreamnt
atgcctcgctatgatgatcgctatggaaacactcgcctctatgttggtcgcttatcatct
agaactcgtaccagagaccttgagcgtctctttagcagatacggaagagtacgagatgtg
gatatgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatgacgca
agatattacttggatggacgggatttcgatggaagtcgcatcactgtggaggcatcaaga
ggggctcctcgtggttcgcgggacaatggtagcagaggcccacctcctggttctggtcgc
tgttttaattgtggtgtcgatggccactgggcccgagactgcacagcaggagactggaag
aataaatgttaccgctgtggtgaaagaggacacattgagagaaactgcaaaaacagtcct
agtccaaagaaggccaggcagggtggaagctattccaggtcaccagtcaaatcccgctcc
cctcgtcgccgaaggagcccaagccgtagccgtagttacagtcgaggtcgcagctacagt
cgatcgcgatccccagtgagaagagagaaaagcgtggaggacagatcacgcagtcctaag
gcaatggagcgatctgtatctcccaaaggtagggaccaaagcctgagtccagaccgaaaa
gtgatagatgcaagcccaaagcgtggatcagactatgatggtagcccaaaagagaatggt
aatggcaggaactctgcgagtcccattgttggaggtggtgaaagtcctgttggacttaat
ggtcaagacaggagcccgattgatgatgaggctgagcttagccgtccttcccctaaaggc
agtgagtcaccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (48)   

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