KEGG   Arabidopsis thaliana (thale cress): AT3G63000
Entry
AT3G63000         CDS       T00041                                 
Symbol
NPL41
Name
(RefSeq) NPL4-like protein 1
  KO
K14015  nuclear protein localization protein 4
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT3G63000 (NPL41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT3G63000 (NPL41)
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    AT3G63000 (NPL41)
SSDB
Motif
Pfam: NPL4 UN_NPL4 DWNN OTU1_UBXL TBP-binding ubiquitin
Other DBs
NCBI-GeneID: 825475
NCBI-ProteinID: NP_191859
TAIR: AT3G63000
UniProt: Q9LYC2 A0A654FK88
Structure
Position
3:23283592..23285540
AA seq 413 aa
MTMLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFL
AFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMR
VGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVEVNFIYEPPQ
QGMEDNLILMRDSEEEKRVDAIALGLGMRRVGFIFNQTVTQDKKEYTLSNVEVLLAAQLH
AESELKEWVTAVVKLEINEDGGADVHFEPFQMSDMCVRLFKEGWFETEIGPEDDPKLSKL
KKEVVVGVKDVKEVDNDFFLVLVKILDHQGPLSCTFPIENRNTQTTMRALKTHMERARSL
PFVKRISDFHLLLFVAQFLDVSSDVPALAECVRLQSHVPEGYELLIDSMANTS
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgacgatgctcagagtccgaagcagagatggattggagagagtgagtgtagatggacct
catatcacagtctcccaactcaaaaccctaatccaagatcagcttcagatccctatccac
aaccaaaccttatccaccaatagaaaccttctcctcgctaagagcccttctgatttccta
gcgttcaccgacatggccgatcctaacctccgaatctcgtctctcaatctagctcacggc
tctatggtctaccttgcttacgaaggtgagcgtacgattcgtggtggtcctgctgtaacg
cctgctggttccttcgggaggaagatgaccgtcgaagatctaatcgctcgacagatgcgc
gtcggtcgccaggagaaggctcactgcgattccgtctcgttcgatcgcgattgcgccaat
gcgtttcagcatttcgtcaacgagtcgcttgccttcgctgtcaaacgcggtggattcatg
tacgggaacgtctctgaggatggtcaggttgaggtgaatttcatctacgagccaccgcag
caagggatggaggataatctgattctgatgagagactctgaggaagagaaacgtgttgat
gctattgctttagggttagggatgaggagagttgggtttatattcaaccagactgtgact
caggacaagaaggagtacactttgtctaacgttgaggtgttgcttgcggctcagcttcac
gctgagagcgaattgaaggagtgggtcactgctgttgtgaagcttgagatcaatgaggat
ggtggtgctgatgttcactttgagccgtttcagatgagtgatatgtgcgttaggttgttt
aaggaaggatggttcgagactgagattggacctgaggatgatcccaagctctccaagttg
aagaaagaggttgttgttggagtcaaggatgttaaagaagtcgataatgatttcttcctt
gttctcgtcaagatcttggatcatcagggaccgttgtcgtgtaccttcccgatagagaac
aggaacactcaaacaacaatgcgggctttgaaaacgcatatggagcgagcaaggagcctc
ccattcgtgaagaggatctctgattttcatctgcttctctttgtggctcagtttctagac
gtatcatccgacgtccctgcgttggctgaatgcgtccgtctacagtctcatgtccctgag
ggatatgagttgctcatcgactccatggccaatacttcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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