KEGG   Arabidopsis thaliana (thale cress): AT4G15900
Entry
AT4G15900         CDS       T00041                                 
Symbol
PRL1
Name
(RefSeq) pleiotropic regulatory locus 1
  KO
K12862  pleiotropic regulator 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT4G15900 (PRL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT4G15900 (PRL1)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT4G15900 (PRL1)
Spliceosome [BR:ath03041]
 Complex B
  Other components
   Prp19 complex
    AT4G15900 (PRL1)
 Complex C
   Prp19-CDC5 complex
    AT4G15900 (PRL1)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    AT4G15900 (PRL1)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 Nup160 WDR54
Other DBs
NCBI-GeneID: 827272
NCBI-ProteinID: NP_193325
TAIR: AT4G15900
UniProt: Q42384 Q08A56
Position
4:9023666..9027808
AA seq 486 aa
MPAPTTEIEPIEAQSLKKLSLKSLKRSLELFSPVHGQFPPPDPEAKQIRLSHKMKVAFGG
VEPVVSQPPRQPDRINEQPGPSNALSLAAPEGSKSTQKGATESAIVVGPTLLRPILPKGL
NYTGSSGKSTTIIPANVSSYQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGHLGWVR
SVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDK
QVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSG
HDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFA
SASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSF
QQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDENATPETHPINFKPP
KEIRRF
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgccggctccgacgacggagatcgaacccatcgaagcacagtcactgaaaaagctcagt
ctcaaatccctcaaacgatcacttgaactcttctctcccgtccatggccaattccctcct
cctgacccggaagccaagcagattcgtctcagccataagatgaaagttgcgtttggaggt
gtagaacctgttgtgagtcaacctccacgtcaacctgaccgcatcaatgagcagccagga
ccttcaaatgctctttccctcgcagctcctgaagggtctaagagtacgcaaaagggtgcg
acagagagtgctattgttgttggtccaactttactgcgtccaatactgcctaaaggcttg
aactatacaggttcctcagggaagagcaccaccattatacctgcaaatgtatcttcatat
caaagaaatctgtcaactgctgcattaatggagagaataccaagtagatggccccggcca
gagtggcatgcaccatggaagaattacagggtcattcaggggcacttgggttgggtcaga
tctgttgcgtttgacccgagtaatgaatggttttgtactggttcagctgatcgtaccatc
aagatatgggatgtagcaactggagttctgaagctaacacttactgggcatatcgagcaa
gtacgaggcctcgctgtaagcaatcgacatacctatatgttctctgctggtgatgacaag
caagtcaaatgctgggaccttgagcagaataaggttatccgatcttatcatggtcacttg
agtggtgtctattgcttagctctgcacccaactttggatgttttattaactggggggcga
gactctgtctgcagggtgtgggatattcgtaccaagatgcaaatttttgcactctcagga
catgacaacaccgtttgttctgtatttactcgtccaacagacccacaagttgtcaccgga
tcccatgacacgaccattaaattttgggaccttcgatatggaaaaacaatgtcaacgcta
acacatcataagaaatctgtccgagcaatgaccctccatcctaaagagaatgcctttgct
tctgcatcagctgacaacaccaagaaatttagccttccaaagggagagttctgccacaac
atgctttcgcaacagaaaaccataattaatgcaatggctgtaaacgaggatggtgtgatg
gtcactggaggtgataatggaagtatatggttctgggactggaagagtggtcacagtttc
caacagtcagaaactatcgtacagcctggttccctggagagtgaagcgggtatatatgca
gcgtgttatgataatacaggttcaagattggtaacatgcgaggctgataagacgataaag
atgtggaaagaagatgagaatgcaactccagaaactcatcctatcaatttcaaaccacca
aaggagattaggcgcttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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