KEGG   Arabidopsis thaliana (thale cress): AT4G23800
Entry
AT4G23800         CDS       T00041                                 
Symbol
3xHMG-box2
Name
(RefSeq) HMG (high mobility group) box protein
  KO
K09273  upstream-binding transcription factor
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ath03000]
    AT4G23800 (3xHMG-box2)
   03021 Transcription machinery [BR:ath03021]
    AT4G23800 (3xHMG-box2)
Transcription factors [BR:ath03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    AT4G23800 (3xHMG-box2)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     AT4G23800 (3xHMG-box2)
SSDB
Motif
Pfam: HMG_box HMG_box_2 CHDNT
Other DBs
NCBI-GeneID: 828480
NCBI-ProteinID: NP_194111
TAIR: AT4G23800
UniProt: Q9SUP7 A0A178UXS1
Position
4:12390167..12392710
AA seq 456 aa
MATNADPAPTKKPRNSRKALKQKNELVETPPSPVSVKGKSAKSFEQDLMEMQTMLEKMKI
EKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQSSLT
QAEQEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENPEADFKETSNILGAKWKSLS
AEDKKPYEERYQVEKEAYLQVIAKEKREKEAMKLLEDDQKQRTAMELLDQYLNFVQEAEQ
DNKKKNKKEKDPLKPKHPVSAFLVYANERRAALREENKSVVEVAKITGEEWKNLSDKKKA
PYEKVAKKNKETYLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEALQMLKKKEKTDNLI
KKEKATKKKKNENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKEL
SEEEKQVYNGKAAKLMEAYKKEVEAYNKKSAATTSS
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcgaccaacgcagatccagctccgacgaagaaaccaaggaacagtagaaaggcgttg
aagcagaagaatgagctcgtggagacgccaccatcgcctgtctccgtcaaggggaagtca
gcgaagtctttcgagcaagatctgatggagatgcagacaatgttggagaagatgaagatc
gagaaggataagacggaggagttacttaaggagaaggatgagattctgagaaagaaggag
gaggagctagagaccagagacgctgagcaggagaagctcaaggtggagctgaagaagctt
cagaagatgaaggaattcaaacctaacatgacttttgcttgcggtcagtcatctctcaca
caggctgagcaagaaaaggcgaataagaagaagaaaaaggattgtcctgagacaaagcga
ccatcgtcctcatacgttttgtggtgtaaagatcaatggactgaagtcaagaaggaaaac
cctgaggctgacttcaaggagacttcgaacattctgggggctaaatggaagtctcttagt
gcagaagataagaagccttacgaggaaaggtaccaggttgagaaagaagcttacctccag
gtcattgctaaggagaagcgcgagaaggaggccatgaagcttctggaggatgaccagaag
cagagaactgcaatggaattgcttgatcagtatctcaactttgtccaggaagctgaacag
gacaacaagaagaagaacaagaaggagaaggaccctctgaagccaaaacatcccgtatct
gccttccttgtttatgcaaacgagaggagagctgctttacgcgaagaaaacaaaagcgtc
gtggaggtcgcaaagatcactggagaggagtggaagaacttgtcagacaagaaaaaggca
ccctacgagaaggtggcaaagaagaacaaggagacatacctgcaagcaatggaggaatac
aagaggacaaaggaagaagaagccctgagtcagaagaaagaagaagaggaactcttgaaa
ctccacaaacaagaagctcttcaaatgcttaagaagaaggagaaaactgataatctgatc
aagaaggagaaggcgaccaagaagaagaagaacgaaaacgttgaccctaacaaaccaaag
aagcctgcttcttcatactttctcttcagcaaggacgaaaggaagaaattgacagaagaa
cgtcccgggacaaacaacgctactgttactgctctcatttcactgaaatggaaggaattg
agtgaagaagagaagcaagtttacaacggaaaggccgcaaaactgatggaagcatacaaa
aaggaagtggaagcttacaacaagaagtctgcggctactaccagtagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (136)   
   KEGG ORTHOLOGY (1)   
   RefGene (128)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (150)   

Download RDF
DBGET integrated database retrieval system