KEGG   Arabidopsis thaliana (thale cress): AT4G31490
Entry
AT4G31490         CDS       T00041                                 
Name
(RefSeq) Coatomer, beta subunit
  KO
K17301  coatomer subunit beta
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT4G31490
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT4G31490
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    AT4G31490
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   AT4G31490
SSDB
Motif
Pfam: Adaptin_N Coatomer_b_Cpla Coatamer_beta_C HEAT_2 Cnd1 HEAT Coatomer_g_Cpla Gemini_V2 RAG2
Other DBs
NCBI-GeneID: 829276
NCBI-ProteinID: NP_001329406
TAIR: AT4G31490
UniProt: Q9SV20 A0A178V1V6
Position
4:15268446..15273230
AA seq 948 aa
MDKSSTMLVHYDKGTPAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIR
YVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRMKETEIVEPLTPSVLQNLEHRHPFVRRNAILAIMSIYKLPHGDQLFVDAPEMIEKVLS
TEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEK
GKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILL
DRLYELKTLHRDIMVELIIDVLRALSSPNLDIRRKTLDIALDLITHHNINEVVQMLKKEV
VKTQSGELEKNGEYRQMLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVASALDVVVFVR
EIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGE
LPFYSVSEESEPTETSKKIQPTSSAMVSSRKPVILADGTYATQSAASETTFSSPTVVQGS
LTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKTVSQALLIMVSILQLG
QSPVSPHPIDNDSYERIMLCIKLLCHRNVEMKKIWLESCRQSFVKMISEKQLREMEELKA
KTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYSLAP
ERSMQIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCSEVAF
RTMWAEFEWENKVAVNTTIQNEREFLDHIIKSTNMKCLTAPSAIAGECGFLAANLYAKSV
FGEDALVNLSIEKQTDGTLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggacaaatctagtaccatgcttgttcactatgacaaagggactccagcagttgctaat
gagattaaagaagctctcgaaggaaatgatgttgaagctaaagttgatgccatgaagaag
gcaattatgcttttgctgaatggtgaaaccattcctcagcttttcattaccattataaga
tatgtgctgccttctgaagaccacaccatccaaaagcttctgttgctgtacctggagctg
attgaaaagacagattcgaaggggaaggtgttgcctgaaatgattttgatatgccagaat
cttcgtaataaccttcagcatccgaatgagtacatccgtggagtgacactgaggtttctc
tgtcggatgaaggagactgaaatagtggaacctttgactccatcagtgttacaaaatctg
gagcatcgccatccatttgttcgcaggaatgcaattctggcaatcatgtcgatatataaa
cttccacatggcgaccaactcttcgtggatgcacctgaaatgatcgagaaagttctatca
acagaacaagatccttctgccaagagaaatgcatttctaatgctctttacctgtgccgaa
gaacgtgcagtgaattatcttctgagcaatgttgacaaggtttcagactggaatgaatca
cttcagatggtggtgctggagctgattcgaagtgtgtgtaagactaaaccagcggagaag
ggaaaatatattaaaattattatttctctgttaagtgctacttcttctgcagttatctat
gaatgtgctgggacacttgtttctctctcatctgcccctactgctattcgagctgctgcc
aacacctactgccaacttcttctttctcagagtgacaacaatgtgaagcttatcttgctc
gatcggttgtatgagcttaagacattgcacagagatatcatggttgagctgataatcgat
gtgctcagagcactctcaagcccaaaccttgatatccgcaggaagacacttgacattgcc
cttgacttgattacccatcataatattaatgaagtcgttcaaatgttgaagaaagaagtt
gtgaagacacagagtggagaacttgagaagaatggagagtacaggcaaatgcttattcaa
gccatccatgcttgtgcagttaagttccccgaagttgcaagcacagtggtccatcttctg
atggatttcctgggagatagcaacgtggcttcagctcttgacgtggttgttttcgttaga
gagataatagaaacaaatcccaagttgagagtttcaatcatcaccaggttgttggacacg
ttctatcagatccgtgcaggaaaggtctgcccttgtgcactttggatcattggtgagtat
tgcctatcactttcagaagttgagagtggcatttcaactattacacaatgccttggcgaa
ttaccattttactctgtttctgaggagtctgagccaactgagacatcaaagaagattcag
cctacctcttctgccatggtgtcctctagaaagccagttattcttgctgatggaacttat
gctacacaaagcgcagcctctgaaaccacattctcctcgcctacagttgttcaaggatca
ctgacttctggaaatttgagggcactccttctaactggtgattttttcctcggagctgtg
gttgcttgcacgttgaccaaacttgttcttaggttggaagaggttcagtcttccaaaact
gaagtaaacaagacagtatcacaggctttgctaatcatggtttctattttgcaacttggg
caatctcctgtttctccacaccctattgataatgattcgtatgagcggattatgttgtgc
ataaaattgctttgccataggaatgttgagatgaaaaagatatggttggaatcctgccgc
cagagttttgtcaagatgatttctgaaaaacagcttagagagatggaggaactgaaggca
aagacccaaacaactcatgctcaaccggatgatctaattgacttcttccatctaaagagt
cggaagggaatgagtcaacttgagttggaagaccaggtacaagatgacctaaagcgtgca
actggagaattcaccaaggacgagaacgatgctaacaaacttaaccgcattcttcaactc
acaggattcagtgacccagtctatgctgaagcatatgtaacggtacaccattatgatatt
gctcttgaagttacagtaatcaaccgaaccaaggaaacccttcagaacttgtgcttggag
ttagcaaccatgggtgatctcaaacttgttgagcgtcctcagaactatagtctggcacct
gaaagaagcatgcagattaaagcaaacatcaaggtctcgtccacagagacaggagtcata
ttcgggaacatcgtctatgagacatcaaatgtaatggagcgcaatgttgtggttcttaac
gacatacacattgatatcatggactatatctcccctgctgtgtgctcagaggttgctttc
agaactatgtgggcagagtttgaatgggaaaacaaggttgctgtgaacaccacaattcaa
aacgaaagagaattcctcgaccacattatcaaatccacaaacatgaaatgtctcactgct
ccatctgcaatagcaggtgaatgtggattccttgcagcaaacttatatgcaaaaagtgtg
tttggtgaggatgctcttgtgaatttgagtattgagaagcaaacggatggaacattgagt
ggttacataaggataaggagcaagacgcaagggattgctctaagtcttggagacaaaatc
accctcaaacaaaagggtggtagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (46)   

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