KEGG   Arabidopsis thaliana (thale cress): AT4G31720
Entry
AT4G31720         CDS       T00041                                 
Symbol
TAFII15
Name
(RefSeq) TBP-associated factor II 15
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AT4G31720 (TAFII15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT4G31720 (TAFII15)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT4G31720 (TAFII15)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     AT4G31720 (TAFII15)
   Coactivators
    SAGA/TFTC/STAGA complex
     AT4G31720 (TAFII15)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     AT4G31720 (TAFII15)
    STAGA complex
     AT4G31720 (TAFII15)
    TFTC complex
     AT4G31720 (TAFII15)
    SAGA complex
     AT4G31720 (TAFII15)
    SLIK complex
     AT4G31720 (TAFII15)
SSDB
Motif
Pfam: TFIID_30kDa Bromo_TP VirC2
Other DBs
NCBI-GeneID: 829300
NCBI-ProteinID: NP_001329548
TAIR: AT4G31720
UniProt: O04173 A0A178V2H6
Position
4:complement(15353796..15356431)
AA seq 134 aa
MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA
TQKFVADVASDALQHCKARPAPVVKDKKQQKDKRLVLTMEDLSKALREYGVNVKHPEYFA
DSPSTGMDPATRDE
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaatcacggccaacaatctggtgaggcaaagcatgaagatgatgctgctcttacagag
ttccttgcttctctgatggattatactcctactattcctgatgatttagtggagcactac
ttggctaagagtggatttcagtgccccgacgtacgattgataaggctagttgctgtggct
acacaaaagtttgttgcagatgttgccagtgacgcccttcagcattgcaaggctagacca
gcaccagttgtgaaagacaaaaaacagcaaaaggataagcgtttggtattgacaatggaa
gatctttcaaaagctttgcgtgagtatggtgtgaacgtgaagcatccagaatattttgct
gatagcccttcgactggaatggaccctgcaacaagggacgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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