KEGG   Arabidopsis thaliana (thale cress): AT5G06140
Entry
AT5G06140         CDS       T00041                                 
Symbol
SNX1
Name
(RefSeq) sorting nexin 1
  KO
K17917  sorting nexin-1/2
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G06140 (SNX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G06140 (SNX1)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ath04990]
    AT5G06140 (SNX1)
Membrane trafficking [BR:ath04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    AT5G06140 (SNX1)
Domain-containing proteins not elsewhere classified [BR:ath04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   AT5G06140 (SNX1)
SSDB
Motif
Pfam: PX Vps5
Other DBs
NCBI-GeneID: 830501
NCBI-ProteinID: NP_196232
TAIR: AT5G06140
UniProt: Q9FG38 A0A178UD05
Position
5:complement(1855995..1858903)
AA seq 402 aa
MESTEQPRNISGSMQSPRSPSSHPYLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGP
EKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRAALDIFVNRI
ALHPELQQSEDLRTFLQADEETMDRFRFQETSIFKKPADLMQMFRDVQSKVSDAVLGKEK
PVEETTADYEKLKHYIFELENHLTEAQKHAYRLVKRHRELGQSLLDFGKAVKLLGACEGE
PTGKAFSDLGTKSELLSIKLQKEAQQVLMNFEEPLKDYVRYVQSIKATIAERGTAFKQHC
ELSETTKLKEINLDKLMLTRSDKVGEAEIEYREIKAESEEATRRFERIVKRMEDEIVRFQ
EQKTEEMGVAFHQFAKGQARLANSVADAWRSLLPKLEASYSV
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggagagcacggagcagccgaggaacatctccggatcgatgcagagccctagatctccg
tcttcgcatccgtatctgtcagtctccgtcacagatcctgtcaaattaggcaatggcgta
caagcttatatctcttacagagttatcaccaagactaacttgccggagtaccaaggaccc
gagaagattgttattagacgatacagtgatttcgtctggttacgggatcggctttttgaa
aagtacaagggcattttcattcctcctcttccagagaagagtgctgtagaaaaattccgc
tttagtgccgaatttattgaaatgaggcgagcagcattggatatatttgttaatcgaata
gcattacaccctgagcttcagcagagtgaggatcttaggacctttttgcaagcagatgaa
gagacaatggacagattcaggtttcaggaaactagtatattcaagaagcctgcagatcta
atgcaaatgtttagggatgtccagtcaaaagttagtgatgctgtccttggaaaagaaaaa
cctgttgaagaaactactgctgactacgagaagcttaaacattacattttcgagcttgag
aaccacttgactgaggctcagaagcatgcgtatcgcctagtcaagaggcatagagagttg
ggtcaatcactgttggattttggcaaggctgtaaaacttcttggggcttgtgagggtgaa
cctacaggaaaagcattttccgatcttggaactaaatctgaactgttatcgattaagctc
cagaaagaggctcaacaagtcctgatgaacttcgaggaacccttgaaggactatgttcgt
tatgtacaatcgattaaggcaacaatagcagaacgaggcactgctttcaaacaacattgt
gaattgtcagaaacaacaaagttaaaagaaataaatcttgacaaactcatgctcacacgt
tcagacaaagtaggagaagctgagatcgaatacagagagataaaagcagaaagtgaggaa
gccacgagaagatttgagaggatagtaaagagaatggaagatgagatagtaaggtttcaa
gagcagaagacggaagagatgggagtggcattccatcagtttgcgaaaggacaagctcgc
ttagcaaacagtgtcgcggatgcttggagatcccttcttcccaaacttgaagcttcttat
tctgtctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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