KEGG   Arabidopsis thaliana (thale cress): AT5G20160
Entry
AT5G20160         CDS       T00041                                 
Name
(RefSeq) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03008  Ribosome biogenesis in eukaryotes
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT5G20160
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AT5G20160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT5G20160
   03009 Ribosome biogenesis [BR:ath03009]
    AT5G20160
Spliceosome [BR:ath03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    AT5G20160
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    AT5G20160
SSDB
Motif
Pfam: Ribosomal_L7Ae
Other DBs
NCBI-GeneID: 832138
NCBI-ProteinID: NP_001154723
TAIR: AT5G20160
UniProt: F4K456
Position
5:complement(6803694..6805226)
AA seq 109 aa
MTGEVVNPKAYPLADSQLSITILDLVQQATNYKQLKKGANEGIRLLLMCVCLSYLLSLMF
VKLFLIYLNLFISATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKV
NT seq 330 nt   +upstreamnt  +downstreamnt
atgaccggagaagtcgtcaaccctaaagcgtatccgcttgcagattctcagttatcgata
acaattcttgacctcgttcaacaagctactaactacaagcagctcaagaagggtgctaat
gaaggtatccgcttgttactcatgtgtgtttgtctctcttatttattgagtttaatgttt
gtgaagttgttcctgatttatttaaatttgttcatttcagctacgaagactcttaatcgt
ggaatctccgagtttgttgtcatggctgcagatgctgagcctctagagattcttcttcat
cttcccctacttgctgaggataaggtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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