KEGG   Arabidopsis thaliana (thale cress): AT5G25780
Entry
AT5G25780         CDS       T00041                                 
Symbol
EIF3B-2
Name
(RefSeq) eukaryotic translation initiation factor 3B-2
  KO
K03253  translation initiation factor 3 subunit B
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT5G25780 (EIF3B-2)
   03012 Translation factors [BR:ath03012]
    AT5G25780 (EIF3B-2)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     AT5G25780 (EIF3B-2)
Translation factors [BR:ath03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    AT5G25780 (EIF3B-2)
SSDB
Motif
Pfam: eIF2A RRM_1 ANAPC4_WD40 IKI3
Other DBs
NCBI-GeneID: 832647
NCBI-ProteinID: NP_568477
TAIR: AT5G25780
UniProt: Q8GUM1 A0A178UL74
Position
5:complement(8973247..8976913)
AA seq 714 aa
MAAVVDIDVLTAQLGINWSDVNLDSIQLPPGNDFGIESDDESVYQDDQSEFDTGFGNIIV
VDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLLMPVDPDTKMTLGYCFIEFNTPQEAQ
NAKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQERPYVPGENLQKWLTDDKARD
QLVIRFGHDTEVYWNDARQKKPEPVHKRSYWTESYVQWSPIGTYLVTLHKQGAAVWGGAD
TFTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKG
SADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDN
VVDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGE
YLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIH
GDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFF
NVDELETMATAEHFMATDIEWDPTGRYVATSVTTVHEMENGFTIWSFNGNMVYRILKDHF
FQLAWRPRPASFLTAEKEEEIAKNLRNYSKRYEAEDQDVSLLLSEQDREKRRALNEEWQK
WVMQWKSLHEEEKLVRQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQELM
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggcggcggttgttgatattgatgtcctaacagctcagttagggattaattggtcagat
gttaatctcgattcaatccaacttcctcctggaaacgactttgggatcgaaagtgatgat
gaaagtgtttaccaagatgaccagtcagaattcgacactggattcggtaacattatcgtt
gtcgatcacctccctgttgttcccaaggagaagtttgagaaactagaaggtgttgttaag
aaaatttacaaccagttaggtgtgattaaggaaaatggactgttgatgcccgttgatccc
gatactaagatgacattgggctactgttttattgagttcaacactcctcaggaagcacaa
aacgctaaggaaaagtctcatggctacaagttggacaagtctcacatatttgctgttaat
atgttcgatgatttcgataggttgatgaatgtgaaggaggagtgggagcctcctcaagaa
aggccctatgtccctggggaaaatttgcagaagtggcttactgatgacaaagcccgggac
cagctagtcattcgttttggccatgatactgaagtttactggaatgatgctaggcagaag
aagcctgaacctgttcataagcgttcttattggacagagagttatgtgcagtggtctcca
ataggtacataccttgtgacacttcacaagcagggggcagctgtttggggtggtgctgat
acatttacgcgtctcatgcgttatcagcattcaatggtcaaactagttgatttctcgcct
ggtgagaaatatcttgtaacttaccatagccaagaaccaagcaatccgagagatgcaagt
aaagtagagattaaggtctttgatgtgagaaccgggaggatgatgagagatttcaagggt
agtgctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgtt
ttcagatgggctggcggaaaagatgataaatactttgccaagctgagcaaaaacactatc
tctgtctatgagactgagactttcagcctaatagacaagaaatccatgaaggttgataat
gttgtggatatttgctggtctcccactgattcaatcctttcattgtttgttcctgaacaa
ggtggtggaaaccaaccagccaaggttgctctagtccaaatcccgagtaaggtagagctg
aggcagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagag
tatcttgctgttaaggttgatcgatacacaaaaactaagaagagtacatactctggattt
gagcttttccgtatcaaagaaagggatattccaatcgaggttcttgagctggataacaag
aacgataagatcattgctttcgcgtgggagcccaagggtcacaggtttgctgtgattcat
ggtgaccagccaagaccggatgttagtttctactcgatgaagactgcacaaaacactgga
agagtttcaaagctcgcaactttgaaggccaaacaagccaatgccctcttctggtcgccc
acaggcaagtacatcattcttgctgggttaaaaggtttcaatggccagcttgaatttttc
aacgtggatgagctcgagacaatggccacagctgaacacttcatggccacagatatcgaa
tgggacccaactggaaggtacgttgcaacctcagtgacaacagtccacgagatggagaat
gggttcaccatatggtctttcaatgggaatatggtttaccggatactgaaggatcatttc
ttccagttggcttggcgtccaagaccggcatcattcttgactgcggagaaggaagaagag
atagcaaagaacctgaggaattacagcaagaggtatgaggcagaggatcaggacgtgtcg
ttgctattgagtgaacaagacagagagaagaggagggcattgaatgaagagtggcagaaa
tgggtgatgcagtggaagtctctgcatgaagaggagaaactcgtgaggcaaaatcttcgg
gatggtgaagttagtgatgtggaagaagatgagtatgaagccaaagaagttgagtttgag
gatcttattgatgttactgaggaaattgttcaagagttgatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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