KEGG   Arabidopsis thaliana (thale cress): AT5G41360
Entry
AT5G41360         CDS       T00041                                 
Symbol
XPB2
Name
(RefSeq) homolog of Xeroderma pigmentosum complementation group B 2
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03022  Basal transcription factors
ath03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AT5G41360 (XPB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT5G41360 (XPB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT5G41360 (XPB2)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT5G41360 (XPB2)
Enzymes [BR:ath01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT5G41360 (XPB2)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AT5G41360 (XPB2)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AT5G41360 (XPB2)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom
Other DBs
NCBI-GeneID: 834138
NCBI-ProteinID: NP_568591
TAIR: AT5G41360
UniProt: Q9FUG4 A0A178UFA0
Position
5:16544333..16549327
AA seq 766 aa
MGNDERKRPTKKMKYGGKDDQKMKNIQNVEDYYDDADEDSRDGEGEEKRRDFTDLELKPD
HGNRPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
LETETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS
DDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAL
VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR
SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTS
DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRK
VISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
AMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAG
SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
SFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKALKTRRSM
GSMSAMSGANGRVYMEYNSGRQKSGNQSKKPKDPTKRHNIFKKRYV
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgggaaacgatgaaagaaaacgacctacaaagaagatgaagtacggtgggaaggatgat
caaaagatgaagaacatacaaaacgttgaagattactatgatgatgctgatgaggattct
cgtgatggtgaaggagaggagaagaggagagattttactgatttggagttgaagccggat
catggaaataggcctttgtgggcttgtgctgatggaaagattttcttggagacattttct
cctctctataaacaagcttatgactttcttatcgccattgctgaacccgtttgcaggcct
gagtcaatgcacgagtataatttaaccccacactcgttgtatgctgctgtttccgttggt
cttgagacagaaactatcatctctgttttgaataagctatctaagaccaagctacccggg
gagatcattgatttcatccatgcttctactgctaattatgggaaagtgaagttggtattg
aagaaaaatcggtattttattgaatcaccattcccggaggtgttgaaaaggcttctcagt
gatgatgtcataaatcgagcaagatttacttctgagccatattatggtggtgatggattt
acgatcggcaaaacaagtggtgaacttgaagcaggacctggggagttgttgaatgaagca
gaattggcagcagcagcagaagagaaagaaactcactcatttgagatagaccctgcactg
gtggagaatgttaagcagcgttgcttgccaaatgccttgaattaccctatgttagaggaa
tatgacttcaggaacgataatgttaatcctgatcttgacatggaactgaagccccatgca
caaccaaggccataccaggaaaaaagtttgagcaaaatgtttggaaacggacgagcaaga
tctgggattatagtgttaccttgtggagctggtaaatctctagttggtgtttctgcagcg
gctcgtataaagaagagttgtctttgtttggcaacgaatgctgtctcggtggatcaatgg
gcctaccaatttaagttgtggtctactataaaagatgaccaaatatgccgtttcacttct
gatagtaaagaacgattccgtggaaatgctggtgttgttgtgacaacctataatatgatt
gcctttggtggtaaacgatctgaagaagcagagaagattatagaagaaatgagaaacaga
gagtgggggttgctgcttatggacgaggtgcatgtggttccagcccatatgtttaggaaa
gttatcagtattacaaaatctcactgcaagctaggacttacagccacccttgtgagagaa
gacgaaaaaattacagatttaaacttcctcattggcccgaaactctatgaagccaattgg
ctagatttagttaaaggaggctttattgcaaatgttcagtgtgctgaagtatggtgtccc
atgaccaaagagttttttgcagaatatctgaagaaagagaactcgaaaaaaaaacaggcg
ctttatgtcatgaaccctaacaagttcagagcctgtgaatttttgatacgtttccatgaa
caacaacgtggggataaaatcatcgtctttgcagacaatctttttgcacttacagagtat
gcaatgaaactccggaaaccgatgatttacggtgcaaccagccatatcgaacgaacaaaa
attctcgaggcgtttaaaaccagtaaaaccgtgaacactgtattcctgtcaaaggttggt
gataactccatagatatccctgaagcgaatgtgatcatccagatttcgtcacatgctggt
tctagacgtcaagaggctcaacgtttgggtcgtatccttagggctaagggtaaacttgaa
gatagaatggctggtggaaaagaagagtacaatgcattcttctactcgcttgtttctacc
gatacacaggaaatgtattattcaacgaaaagacagcagtttttgatcgaccaaggttat
agcttcaaggtaataacaagcctcccacctccggacgcgggttcaagcttgggctaccac
agtcaagaagaacagttgtctcttctcggaaaggtgttgaatgctggagacgatatggtt
ggtttagaacaacttgaagaagacacagatggaaaggctctaaagacgcgacgaagcatg
ggatcgatgagtgcaatgtccggtgcaaatggaagggtctacatggaatacaactcaggt
cgtcaaaaatctggtaaccaatccaagaaacctaaagacccaaccaaacgacacaatatc
ttcaaaaaacgttatgtttga

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